Hyla sarda (Sardinian treefrog): 130319569
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Entry
130319569 CDS
T11475
Symbol
TRIM3
Name
(RefSeq) tripartite motif-containing protein 3 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
hsq Hyla sarda (Sardinian treefrog)
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsq04121
]
130319569 (TRIM3)
Ubiquitin system [BR:
hsq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130319569 (TRIM3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
TEN_NHL
Invasin_D3
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_5
TrAA12
CRLF3_N
RING_XB3-XBAT31
Prok-RING_4
Mala_s_1-like
zf-ANAPC11
Baculo_PEP_C
Csf1
zf-C3HC4_4
CC_BshC
Vgb_lyase
FTR1_4HB
Fib_alpha
INTS1_R4
AAA_13
DUF7605
Motif
Other DBs
NCBI-GeneID:
130319569
NCBI-ProteinID:
XP_056408923
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MMASPVVRQIDKQFLVCSICLERYHVPKVLPCLHTFCEKCLQSYIPPQSLTLSCPVCRQT
SILPERGVSALQNNFFITNLMEVLQRSPESGRQEQSVLPCDGNTAATPLSCPNHQGKTME
YYCGSCETAMCVECTEGEHREHCTVPLKDVLEQHKASLRSQLDSIRSRIPQLTSAIDLVG
EISRQLSERKNAAVNEISSAFEELERALQQRKNALLQDLEAISVTKQKVLQAQLSSLRQG
LDNMESSVRFTEQALGHGSETEVLLVRKQMSERLSELASRDFPLHPQQNPQLEFRVETDG
LRRSLQNLGALLTTSAVAHASVATGEGLRQALVGHQTSVTVTTKDKDGELVRSGNAILQA
QLTGPDGGAHDGDVTDNKNGTYEVFYTPRHEGEHHLSLRLYGQPLRGSPYRVRVVKPGDV
PASPEDVKRRVKSPSGGHIRQKAVRRPSSMYSTNKKKENPIEDEMILRVGSRGRDKGEFS
NLQGISASSNNRIVVADSNNQCIQVFSNEGQFKLRFGVRGRSPGQLQRPTGVAVDMNGDI
IVADYDNRWVSIFTPEGKFKNKVGVGRLMGPKGVAVDRNGHLIVVDNKSCCIFIFQSNGK
LVGRFGGRNPGDKQQTGSLDGPHFVAVNNKNEIIVTDFHNHSVKVYSAEGEFLYKFGSHG
EGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTMADPLYGPQGLALTS
DGHVVVADSGNHCFKVYRYLQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgagcccggtagtgcgtcagattgacaagcaattcctagtctgcagcatttgc
ctggagcgctatcatgtccccaaggtcctgccctgtctgcacaccttctgtgagaagtgt
ctgcagagctacatcccccctcagagcctgaccctgtcctgccccgtctgccgtcagacg
tccatcctcccggagcgaggggtctccgccctacagaataacttcttcatcaccaacctc
atggaagttctgcagaggagcccagagagcgggcgccaggagcaaagtgtcctcccatgt
gatggcaacacagccgctacccccttatcctgccccaatcaccagggcaagacgatggag
tattactgtggttcgtgtgagacggccatgtgtgtggagtgtacggagggcgagcaccgg
gagcattgtaccgtcccgctgaaggacgtcctggagcagcacaaagcgtccctgcgcagc
caactggacagcatccggagcagaatcccgcagctgacctccgccatagacctggtgggt
gaaattagccgtcagctcagcgagagaaagaacgcggcggtgaatgagatcagctcggcc
ttcgaggagctggagcgggcactacagcagaggaagaacgcgctgcttcaggacctggag
gccatatctgtcaccaagcagaaggtcctgcaggctcagctctcctccctcagacaaggc
ctggacaacatggagagcagcgtgcgcttcacagagcaggcccttggtcacggctcggag
acagaagtcctcctggtgagaaagcagatgagcgagcggctgagcgagttggcgtcccgg
gacttccccctccatccccagcagaacccacagctggaatttcgagtggagacagatggg
ctgcgccggtccctgcagaacctgggagcgctcctcaccaccagtgccgtggctcacgcc
tcagtggctacaggggagggtctgcgccaggcgctggtggggcaccaaacctccgtcacc
gtcaccaccaaagacaaagatggagaattggttcgaagtgggaacgccattctccaggcc
cagctgaccggccctgatggaggggcccacgatggtgacgtgacagacaataagaacggg
acttatgaggtgttctacactccgcgccatgaaggggagcaccacctctctctacgcctc
tatggccaacccctgcgcgggagcccctaccgggtgagagtggtaaagccaggagatgtg
ccggcctcaccggaggacgtgaagcgcagggtgaagtcccccagtggaggccacatccgg
caaaaggcggtgaggaggccgtccagtatgtacagcaccaacaagaagaaggagaacccc
atagaagatgagatgatcctccgagtaggttctcgcggccgagacaaaggggaattctcc
aacctacaaggtatatcggcctccagtaacaatcgcattgtggttgcggacagtaacaac
cagtgtatacaggtcttctccaatgaggggcagtttaagctgcgcttcggtgtacggggc
agatccccggggcagctgcagcgcccgacaggtgtggccgtggacatgaacggggacatc
attgtggcggattatgacaatcgatgggtcagcatcttcactcctgaggggaagtttaag
aataaggtgggtgtcgggcgtctcatgggtcctaagggagttgccgtggaccggaacgga
cacctgatcgttgtggacaacaagtcctgctgcatcttcatcttccagtccaatgggaag
ttagttgggaggttcggaggccgtaatccaggggacaagcagcagaccgggagcctagat
ggtccccattttgtggccgtcaataacaagaatgagatcatagtcactgattttcacaac
cactcagtgaaggtgtacagtgcagaaggagagttcctctataagttcggttctcacggc
gaggggaacggtcagtttaacgctcccactggagtcgccgtggattctaatggaaacatc
attgtggccgactggggaaacagccggatccaggtgtttgacagttccggctcctttctg
tcctacattaacacgatggccgacccgttgtacggtccgcaggggctggcgctcacctct
gatggtcacgtggtggtcgccgactctgggaaccattgcttcaaggtgtacaggtacctg
cagtga
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