Hyla sarda (Sardinian treefrog): 130355852
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Entry
130355852 CDS
T11475
Name
(RefSeq) elongation factor 1-alpha, oocyte form
KO
K03231
elongation factor 1-alpha
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130355852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsq03019
]
130355852
03016 Transfer RNA biogenesis [BR:
hsq03016
]
130355852
03012 Translation factors [BR:
hsq03012
]
130355852
04131 Membrane trafficking [BR:
hsq04131
]
130355852
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsq04147
]
130355852
Messenger RNA biogenesis [BR:
hsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130355852
Transfer RNA biogenesis [BR:
hsq03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130355852
Translation factors [BR:
hsq03012
]
Eukaryotic type
Elongation factors
130355852
Membrane trafficking [BR:
hsq04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
130355852
Exosome [BR:
hsq04147
]
Exosomal proteins
Proteins found in most exosomes
130355852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
130355852
NCBI-ProteinID:
XP_056412587
LinkDB
All DBs
Position
2:complement(233189634..233195777)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGKFYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEKRFQEITKEVSTYIKK
IGYDPKTVAFVPISGWHGDNMLEPSSKMPWFKGWKIERKEANASGITLLEGLDSIIPPSR
PVNKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFAPGNLTTEVKSVEMHHEALQ
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQINAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEENPKSLKSGDAALVEMIPGKPMCVETFNNYAP
LGRFAVRDMRQTVAVGVIKAVEKKAASSAKVTKAAVKALKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagagaagattcacattaacatcgtggtcattggccatgtcgactccgggaaa
tccaccactaccggccacttgatctataagtgcggcgggatcgataagagaaccatcgag
aagttcgagaaagaagcggcagagatgggtaaaggttcctttaaatatgcctgggtactg
gacaagctgaaggcagagcgggagcggggcatcaccattgatatctcactatggaagttt
gagactggcaagttctacataaccatcattgatgcccccgggcaccgtgacttcatcaag
aacatgatcaccggcacttctcaggcggactgtgcagtacttattgtggctgctggcgtt
ggggagtttgaagctgggatttcaaagaacggacagactcgtgagcatgcccttcttgcc
tttacgctgggagtcaagcagttaatcgttggcgtgaacaagatggattccacagagcct
ccttacagtgagaaaaggtttcaagaaataacaaaggaagttagcacctacattaagaag
attggttatgaccccaaaactgttgcctttgtgccaatttctggctggcatggagacaat
atgctggaacctagcagcaaaatgccatggttcaaaggctggaagattgaaagaaaagaa
gcaaatgccagtggaattaccctcttagaaggtctggactcaattattccccccagccgt
ccagtaaacaaacctctacgccttcccctgcaagatgtgtacaagattggaggaattgga
acagttccagtaggaagagtggagactggactcttgaagcccggaatggtggtgacattt
gcacctggaaacttgacaacagaagtaaagtctgtggaaatgcatcatgaagctctacag
gaagctttacctggggacaatgttggctttaatgttaagaatgtatctgttaaggatatc
aggagaggcaatgttgctggtgatagcaagaatgacccaccaatggaagctggcagtttc
acagctcaggtaatcatcctcaatcacccaggacagataaatgctggctatgccccagtt
ctggactgtcacactgctcatatagcttgcaagtttgcagagctgaaggaaaaaattgac
cgtcgatcaggcaagaaactggaggaaaaccccaaaagcttaaaatcaggcgatgctgca
cttgttgagatgattcctggaaaaccaatgtgtgtggaaaccttcaataattatgctcct
cttggtcgctttgctgttcgtgacatgaggcagacggtagctgttggtgttattaaagct
gtagaaaagaaggcagcaagcagtgctaaggtgaccaaagctgcagtgaaagctttgaag
aaatga
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