Hyla sarda (Sardinian treefrog): 130356615
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Entry
130356615 CDS
T11475
Symbol
TRIM33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
hsq Hyla sarda (Sardinian treefrog)
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsq01001
]
130356615 (TRIM33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsq04121
]
130356615 (TRIM33)
Enzymes [BR:
hsq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130356615 (TRIM33)
Protein kinases [BR:
hsq01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
130356615 (TRIM33)
Ubiquitin system [BR:
hsq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130356615 (TRIM33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-B_box_Trim66
zf-RING_5
PHD-1st_NSD
zf-C3HC4
zf-C3HC4_2
UvrA_inter
Motif
Other DBs
NCBI-GeneID:
130356615
NCBI-ProteinID:
XP_056414354
LinkDB
All DBs
Position
2:366906997..367047475
Genome browser
AA seq
1100 aa
AA seq
DB search
MADNKGGGGGETEGSESSSSNNNNNGSGQDGSAAGTEAQAVEEAENGDKAAAPVVPVPAS
PAATAAAAAPAEESPAPSSAASSSTPASSSSTSSVVMNLLDTCAVCKQNLQSRESEPKLL
PCLHSFCRRCLPEPERQLSVPLPGGSNGDIQQVGVIRCPVCRQECRQIDLVDNYFVKDAS
ESPSSTDEKSEQVCTSCEDNASAVGFCAECGEWLCKTCIEAHQRVKFTKDHIITKKEDVS
SESVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGA
IENLLAKLLEKKNYVHFAATQVQNRIKEVNDTNKRVEQEIKVAIFTLINEINKKGKSLLQ
QLESVTKERQMKLGQQQNDITGLSRQVKHVMTFTNWAIASGSSTALLYSKRLITFQLRHI
LKARCDPVPVANGAIRFHCDPTFWAKNVVNLGNLIVENKPTPGYAPNVVVGQGPQGTNHV
NKPPAQINLAQLRLQHMQQQVYAQKHQQLQQMRMVQPPGPHQRPSGPQVMHQQPPRLISM
QSMQRNNMNCVPYQAHQMRMAQNAAQNANRMPGVPRHNGPQYSMMQPHLQRQQHSNPGHA
GPFPVVSMHNNAINPTSPTTATMANANRGPTSPSVTSIELIPSVTNPENLPSLPDIPPIQ
LEDAGSSNLDNILSRYISIGHQLPQPTSTMNPSPGPSAMSPGSTGLSNSHTPVRPPSTSS
TGSRGSCGSSGRTVDRNVFKSDTVKVKQEPGTEEDVCSFSGAVKQEKSEDGRRSACMLSS
PESSLTPPLTTTLHLESDLEALANLENHVKTEPNSTNRSCEQSSHGTLVNGKSPVRSSIH
RSPRGGGGGDGTNKDEDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWI
CTFCRDINKPELEYDCDNSQHSKKGKTVQGLNPVDQKKCERLLLYLYCHELSIEFQEPVP
ASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEMMKVVQV
YAETPDFNLQSDSEVAQAGKAVALYFEDKLPEIYPDRTFPPLPEFEPEEDDGEVTEDSDE
DFVQPRRKRLKSDEKPVHIK
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggaggcggtggcggagagacggaaggttcagagagcagcagcagc
aacaacaacaacaatggcagcggacaggacgggagcgctgctggaactgaggcccaggcc
gtggaggaggccgagaatggggacaaggctgcggccccggtggtgccagtgcctgcttcc
cccgccgccaccgctgctgctgctgccccggcagaggagagcccagccccctcctcagcg
gcctcttcttccactcctgcctcgtcctcctccacgtcgtccgtggtgatgaacctgctg
gatacatgtgctgtgtgcaaacagaacctccagagccgggagtcggagcccaagctgctg
ccctgcctgcactccttctgccgccgctgcttgcccgagcccgagcggcagctcagtgtc
ccgctacccggcggcagcaacggggacatccagcaagttggggtgataaggtgcccggtt
tgcagacaagaatgcaggcaaatcgatctagtggacaattactttgtgaaagacgcttct
gaatcgccgagtagcaccgatgaaaagtctgagcaggtttgtacaagttgtgaagacaat
gcaagtgctgttgggttctgtgcagaatgtggggaatggctttgtaagacatgtatagaa
gcacatcaaagggttaaattcacgaaggatcacataataacaaagaaggaagacgtatct
tcagaatcagtgggagcttcaggacagcgtccagttttctgtcccgtccataagcaggag
cagctcaaattgttctgtgaaacttgtgacagattgacttgtcgtgactgccaacttctt
gaacataaggaacacagataccagtttttggaggaggcctttcaaaaccagaaaggtgcc
atagaaaacctcttggctaagctcctggagaagaagaattatgttcattttgccgctact
caggtccagaacaggataaaagaagtgaatgatactaataaaagagtggaacaggaaatt
aaagttgctatcttcaccttaataaatgaaattaataagaagggcaaatctcttctacag
cagttggagagtgtcacaaaagaacgacagatgaaacttggacagcaacaaaacgatata
actggcctctctagacaggtgaaacatgtaatgacctttacaaactgggcaattgcaagt
ggcagcagcacagcattgttgtacagcaaacggctgatcacttttcagttacgtcacatt
ttaaaggctcgatgtgacccagtaccagtagcaaatggagcaataaggttccattgtgac
ccaacattctgggcaaagaatgtagttaatttaggtaatcttattgttgaaaataagcct
actcctgggtacgcacctaatgtggttgtggggcaaggtccccaaggaacaaatcatgta
aataaaccccctgcacaaattaacctagcacaactccgactacagcatatgcagcagcag
gtgtatgctcaaaaacaccagcaacttcagcaaatgcggatggttcagcctcctggccca
catcaaaggccctctggtccacaagtaatgcatcaacagcctccaaggttaatcagcatg
caatccatgcagagaaataatatgaactgtgtaccttaccaagcgcatcagatgagaatg
gcacagaacgctgctcagaatgccaatcggatgccaggtgtacctcgtcacaatggacct
cagtactcaatgatgcaacctcatctccaaagacagcagcactctaatcctgggcatgct
ggtccatttccagtagtttcaatgcataataatgcaatcaatcctactagccctactaca
gcaaccatggcaaatgcaaaccgaggcccaaccagcccgtctgttacgtcaatagaatta
attccatctgtaacaaatccagagaatctgccttctctgcctgacatccctcccattcag
ttagaagatgctggatcaagcaacttagacaacatattaagtaggtacatctcaattggg
catcagcttccacagccaacaagcactatgaatccatctccaggaccatctgccatgtca
ccaggatcaacaggtttgtctaactctcacacaccagtaaggcctcctagtacatcaagc
acaggcagtagaggaagttgtggttccagtggtcgaacagttgacagaaatgtgtttaaa
tctgatacggtgaaggttaagcaggaacctggcacagaagaggatgtgtgtagtttttca
ggagctgttaagcaagagaaatcggaagatggcagacgaagtgcatgcatgctaagcagt
ccagagagcagcctaacaccaccactcaccaccacattgcaccttgaaagtgacctagaa
gccttggccaatctggaaaatcatgtaaagactgagccaaacagcacaaacagaagttgc
gaacagtcttcccatggtacccttgtaaatggaaaatcccctgtccgcagttctattcat
cggtcaccgagagggggaggcggcggtgatgggacaaataaagatgaagatcctaatgaa
gactggtgtgcagtgtgccaaaatggaggagacctcttatgttgtgaaaagtgcccaaag
gtttttcaccttacatgtcatgtaccaaccctccttagttttccaagtggtgaatggatc
tgcacattctgtagagacataaacaaacctgaactggagtacgattgtgataattctcaa
cacagtaagaaagggaagacagtgcaaggcttgaatcctgtggaccaaaagaaatgtgag
cgactgctactgtatctctactgccatgaattaagcattgagtttcaagaaccagttcct
gcatcaataccaaattactacaaaataataaagaagcctatggatctatctacagtgaaa
aagaagctgcagaaaaagcactcacaacactaccagacacctgaagactttgttgcagat
gtcaggctaatatttaagaactgtgagaggttcaatgaaatgatgaaagttgttcaagtt
tatgcagaaacaccagactttaatctgcagagtgactcggaagtggcccaagctggaaag
gctgttgctttatactttgaggacaaacttccagaaatctacccagacaggaccttccca
cctttgcctgagtttgaaccggaggaagatgatggtgaagtaacagaggattcagatgag
gattttgtacagcctcgaagaaaacgcctaaagtcagatgagaagccagtgcatataaag
tga
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