Hyla sarda (Sardinian treefrog): 130357048
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Entry
130357048 CDS
T11475
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130357048 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsq04515
]
130357048 (ROBO1)
Cell adhesion molecules [BR:
hsq04515
]
Immunoglobulin superfamily
ROBO family
130357048 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
C2-set_3
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
Big_4
Adeno_E3_CR1
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
130357048
NCBI-ProteinID:
XP_056415338
LinkDB
All DBs
Position
2:454501129..455717390
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AA seq
1665 aa
AA seq
DB search
MSGTGNCCPLLLLVFLPLSWDLLVSGNVMTKIRTSVSTLTPSAALMLFSTDSEDPERGSN
GVTPPPMSDHDDNSLVYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPAPSI
EWYKGGERVDTDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGTPIDDKDERIT
IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVRRPSNMAVTVDDSV
EFKCEARGDPVPTVRWRKDDGDLPKTRYEIRDDHTLKIRKVIAGDMGSYTCIAENMVGKA
EASAVLTVQEPPNFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWQKEGSQNLLFSYQPP
LSSSRFSVSQTGDLTIVNVQKSDVGYYICQTLNVAGSITTKAYLEVTDVVADRPPPVIRQ
GPQNQTVAVDGTLLLSCVATGIPVPTIHWRKDGSLVNTQESRIKQLDTGALQIRYAKLSD
TGRYTCTASTPSGEASWSAYIEVQEFGVPVQPPRATDPNLIPSAPSKPEVTDVSKNTVTL
SWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVRTESFAVKGLKPNAIYLFLVRAANA
YGLSDPSQISDPVKTQDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQ
QSQYIQGYKILYRPSPENRGESAWSIFEVRTPAKNSAVIPELKKGVNYEIKARPFFNEFQ
GADSEVRFAKTLEEAPSAPPQSVTITKNDGNGTAIVVMWQPPPEENQNGLVQEYKVWCLG
NESRYHINKTVDGSTLSVVIPYLVPGIKYSVEVAASTAAGPGVKSEPQFIQLDSFGNPVP
PGDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRSGLNSTYAGIRKVP
SFTFTPTVAYQRSGEAVSSAGRPGLLNIAEPASQPWLADTWPNTGSNHNECPINCCTSGN
GSSDNNLATYSRPADCIANYNNQLDNKQTNLMVPESGVYSDVDISNKINEMKTFNSPNLK
DGRFVSAAGQPTPYATTQLIQSNISNNINSSSGDTEEKHWKPSTQHKPDVAPMQYNIMEQ
NKINKDYRAADTMPSTIPYNQSHDQNTGGSYNSSDRGSSTSGSQGHKKGTRAPKGSKQAG
MNWADLLPPPPAHPPPHGASEEYTMSTDDGYDRELPCPMPPTRMYLQQDELEEEDERGPT
PPIRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQECQEDLVLAQHQLERRRHQISPPP
PPRPISPPHTYGYISGPIVSDMDTDVPEEEGDEMDMETAKMQSRRLLLRGLGPTPASSVG
DLESSVTGSMINGWGSASEEDNVSSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVAR
HQMHEAAGGRRHFHCPRPTSPVSTDSNMSTAVMQKSRPAKKQKHQQGHLRKDVYTDDLPP
PPLPPPAIKSPTGPSKAQLDMRSGMPQKYTTADQRLDRLAERKGVSYRGRDGADSRHHAE
VRTNSGERRESVDQLDGKMKRGKAAKRDGTPTKTPQEDILPYCKPTFPTSNTPRDPSSSS
SMSSRGSGGRRRTDQATGRRNAAEMQLLGTYERTYDEDEIEETES
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtacaggaaactgctgtcctctcctattgttggtttttctgcctttatcctgg
gatttacttgtgtctggaaatgtgatgacaaaaataagaacttctgtaagcactctgacc
ccatctgcagctctgatgttattctctacagactcggaggacccagaaagggggagcaac
ggcgtcacgccaccgcctatgtccgatcatgacgacaactctctggtgtacacaggctca
cgtcttcgccaggaagatttccctcctcgtattgtggaacatccatcagatctaattgtc
tcaaaaggtgaaccagcaacactaaactgtaaggcagaaggcagaccggctccatcaatc
gagtggtataaaggaggggaaagggtggacactgataaagatgacccacgctcccatcgg
atgttactaccaagtggatcactattttttttgcgcattgtccatggacgcaaaagcaga
ccggatgaaggggtctatgtctgtgttgcgcggaattacctgggagaagcagtcagtcac
aatgcatcccttgaagtagccattctaagagacgacttcagacaaaacccttcagatgtg
atggtcgcagttggagaacctgcagtgatggagtgccaacctcctcggggtcacccagaa
cccacaatatcttggaagaaagatggaacaccaatagatgacaaagacgaacgaatcacg
atacgaggaggaaaactaatgatcacctacacaagaaaaagcgatgcaggaaaatatgtg
tgtgttggcaccaatatggtgggtgaaagggaaagtgaggtagctgaactaacagtatta
gaaagaccatcctttgtaaggaggccgagtaacatggcagtcactgtagacgatagtgtt
gagtttaaatgtgaggctcgaggtgatcccgttcctactgtacggtggaggaaagatgat
ggggatctgcctaaaactaggtatgaaatccgggatgaccacactctgaagattcggaag
gtaatagctggggatatgggatcgtacacgtgcatcgcggaaaacatggttggcaaagca
gaagcatcagctgtcctcactgttcaagaacctccaaattttgtggtgaagcctcgtgat
caggtagttgcattgggacgtacggtcacatttcagtgtgaagcaacgggaaatcctcaa
ccagctatcttttggcagaaggagggcagccagaaccttctcttctcctaccagcctcct
ctgtcatccagccgtttctcagtgtctcagaccggtgacctcacgatcgtgaatgtccag
aagtctgacgttggctattatatctgccagactcttaatgtggcaggcagcattacaaca
aaggcctatttagaggttactgatgtggtcgccgaccgtcccccaccagtcatccgccaa
ggtcctcagaatcaaacagtggctgtggatggcactttactcctaagttgtgtagccacg
gggataccagttcccaccatccactggaggaaagatggcagccttgtcaacacccaggaa
tctcgcatcaagcagcttgatacaggagcactgcagatcagatacgctaagctaagtgac
acgggccggtatacctgcacggcgtccacgccaagcggagaagccagctggagcgcttac
atcgaggttcaagaatttggcgttccggtacaacctccacgagctactgatcccaatctt
attccaagtgctccgtcaaagcccgaagtcaccgatgtcagcaagaacacagtcacttta
tcctggcagccaaacctgaattctggtgccacgccaacgtcgtacatcatagaagccttc
agccatgcttctggaagtagttggcaaacagtggctgaaaacgtcaggacggaatcattc
gccgtcaaaggcctaaaacccaacgcaatctacctcttcctggtgagagcagctaatgcc
tatggactgagcgaccccagtcagatctctgaccctgttaagacacaagatgtcccccct
acaagtcaaggagtggatcacaaacaggtccaaagagaactgggggatgtggttctgcac
cttcataatccaaccatcctctcctcctcttcaattgaagttcattggacggtggaccaa
cagtctcagtacatccaaggctacaagattctctacaggcccagtcccgagaaccgcggg
gaatctgcttggtccatatttgaagtccgaactccagcaaaaaacagtgcagtgatcccc
gagcttaaaaaaggggtaaactatgaaataaaagcccgacctttcttcaatgagttccaa
ggagctgacagtgaagtacgctttgccaagaccctggaagaagcacccagtgccccgcct
cagagtgttactattacaaagaatgatggcaatgggacagcaattgtagtcatgtggcaa
ccacccccagaagaaaaccaaaatggtttggtccaagaatataaggtttggtgtcttggc
aatgagagtcgatatcatattaacaagacggttgatggctccactctctctgtagtcatc
ccctacctagtacctggcatcaagtacagtgtggaggtggccgctagcactgcagcaggg
ccgggggtgaaaagtgagccacagttcatccagctagattcttttggaaacccggtgcct
cccggtgaccaagtaagccttgcccagcagatatcagatgttgtaaagcaaccggccttt
attgcagggatcggggctgcttgctggatcatcctgatggtctttagcatctggttgtac
cgtcatcgcaagaaacgcagtggacttaacagcacctacgctggaatccggaaagtcccg
tcttttaccttcacaccgacagtggcgtaccagcgcagcggggaagcagtgagcagcgcg
ggaagaccggggctattaaacattgcagagcctgcctctcagccatggctggcagatacc
tggccaaacaccggaagcaaccacaatgaatgtcccattaactgctgcacgtctgggaat
ggaagcagtgacaacaatctggccacttacagccgacctgccgattgcatagcaaactac
aacaaccagttagacaacaaacagactaacctgatggttcctgagtcgggtgtttacagt
gacgtagacataagcaacaaaatcaatgagatgaaaaccttcaatagcccgaatctaaaa
gatggtcgatttgtctccgcggccggccaacccaccccttatgccaccactcagcttatt
cagtcaaatatcagcaacaacatcaactcatctagtggggacacggaagagaaacactgg
aagccttctactcaacataaacctgatgtcgccccgatgcagtacaacatcatggagcaa
aataaaatcaacaaagattaccgagccgcagatactatgccatccactataccttacaac
cagtcccatgatcaaaacaccggtggatcgtataacagttcagatcgaggaagcagcaca
tcggggagtcaaggtcataaaaagggaactcgagctccaaaaggatccaaacaggctggt
atgaactgggctgatctgttgccaccaccaccggctcatccgccgccacatggtgccagt
gaggagtataccatgtcaacagatgacgggtatgacagagagctgccatgtccaatgcca
ccaacaagaatgtatctccagcaagatgagttagaagaagaagatgaacgaggtcctaca
cctccaatacgaggggctgcttcttccccagctgccgtgtcctatagccaccagtccaca
gccacgctgactccatcacctcaggaggagctccagccgatgcttcaggaatgtcaggaa
gatttagtactagctcaacatcagcttgagagaagacgacatcaaataagtcccccacct
ccgcccaggcctatatcgccacctcatacatacggatacatttccggaccaatagtgtct
gacatggatacagacgtcccagaagaagaaggggacgaaatggatatggagacggcaaag
atgcaaagtcgaagacttctgttacgtggcttagggccgacccccgcctctagtgtcgga
gacttggagagttcggtcacaggctcgatgatcaacggatggggttctgcctccgaggag
gacaatgtctccagtgggagatcgagtgtcagctcttccgacggctcgttttttaccgat
gccgattttgcacaggctgtcgcggccgccgcagaatacgcaggactgaaagtagcaaga
caccaaatgcacgaagcagcaggtggacggagacatttccactgtcccagacctacaagc
ccggtgtcaacggatagtaacatgagcactgccgtgatgcagaaaagccgcccagccaaa
aaacagaaacaccagcaaggacatctacggaaagatgtctacacagatgatttaccacct
ccgccgttgccacctcccgcaatcaaatccccaactggaccatccaaagcacaactagac
atgcgttctggcatgccacagaagtatacaactgcagatcaaagattagacagactggca
gagaggaaaggggtcagttacagagggagagatggagcagacagcagacaccatgcagaa
gtccggacaaattcgggagagaggagagaatcggtagatcaattagatgggaagatgaaa
agaggaaaagcagcaaaaagagatggcacgccaacaaaaactcctcaagaggacatctta
ccctactgtaagccaacattccctacatcaaatacccctcgagatcccagctcctctagt
tccatgtcttcaagaggatcaggtggaagacgaagaacagatcaagctacaggtcgtagg
aatgcagcagagatgcagctgttagggacgtatgaaagaacctatgatgaagatgaaatt
gaggaaacagaaagttga
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integrated database retrieval system
