Hyla sarda (Sardinian treefrog): 130357103
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Entry
130357103 CDS
T11475
Symbol
PAXBP1
Name
(RefSeq) PAX3- and PAX7-binding protein 1 isoform X1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
hsq Hyla sarda (Sardinian treefrog)
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsq03041
]
130357103 (PAXBP1)
Spliceosome [BR:
hsq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130357103 (PAXBP1)
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Paralog
GFIT
Motif
Pfam:
GCFC
NTR2
Motif
Other DBs
NCBI-GeneID:
130357103
NCBI-ProteinID:
XP_056415451
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Position
2:481488908..481547481
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AA seq
883 aa
AA seq
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MFRKVRRVNVRKRNDSEEEEREHDEPMAVEQPGSVTAEPAVIPGLLQHDGGLKPRKEAKE
VGPGIAKPVALLSFQDDEDEVETFKVKKPNHSKKIVKLLKKEYKEDLEKFRPRSDINFAL
DAGDLQSVRNATTKDNAQEEATAGSDLGEEEMEVESEKEDEKPKAGSFTNSLSSLNVLRP
GEIPDAAFIHAARKKRQMARELGDIPSIDLDGGKSRLVREDENDASDDDDDDEKRRIVFS
VREKSQRQKIAEEIGIEGSDDDALATGEQDEEISRWEQEQIRKGISIPQVQAPQPAEANN
LFYPSTYQGIPYNSAYNIPYTYAAYGAADTKFQKPDNSVTYKTPSNEMTPVTIDLVKKQL
KDRLSAMEDVHKANLELYEKHEKSQEDSNNAIIRLEGCSGGNGERYKFLQEMRGYVQDLL
ECFREKVPLINELESAMHQLYKQRAARLVQRRQDDIKDESSEFSSHSSKAVMAPNLDSFG
RDRATYQEHAKQRRIAEREARRARRRQAREVSGKMAEHLEGLSSDDEETSTDITNFNMEK
DRILKESSKVFEDTLENFHSFDCIKFQFDTWRSSYYNTYKDAYIGLCLPKLLNPLTRLQL
LSWNPLEPKCCDFERMVWFESLLFYGCEEKEFDKDDADIMLLPSLVEKVILPRLAVMAEN
VWDPFSTTQTNRLAAVFQKLINGYPTVVNSDNKNTEALLKALLMRMRRTLDDDVFMPLYP
KNVIENKNSGPCVFFQRQFWSSVKLLGNFLKWYGVLSNKSLQELAIDGLLNRYILMAFQN
NENGEDSIKKAQSVIACFPKQWFSGLKGGKTVPQLENFARYLTHLAGVIYRQNIGCSDIE
KRNARDQIRQIVKLLASIHSLEYAVSVANDYNVKDVKAPVEAK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgttccggaaagtgcggcgggtaaacgtgaggaagcggaatgattcggaggaagaggag
cgggaacatgacgagcctatggcggtggagcagccggggagtgttaccgccgagccggct
gtcattccgggcctcctgcagcacgacggcggcctaaagccacggaaagaagccaaggag
gtcggccccggaatagccaagcctgtggccctgctcagcttccaggacgacgaggacgag
gtggagacttttaaagtgaagaaaccaaatcacagcaagaaaatagtgaagctgcttaaa
aaagaatataaagaagatctggaaaaatttagacctagatctgatattaacttcgcacta
gatgcaggtgatctacagtctgtaaggaatgcaaccaccaaagataatgcccaggaagag
gcgactgctggtagtgacctgggcgaggaggagatggaagtagaaagtgaaaaagaagac
gagaaacccaaagctggctctttcaccaactctctgtcctccttaaatgtgttacgtcca
ggggaaattcccgatgcagctttcatccacgctgctcggaagaagaggcaaatggctcgt
gagctcggagacatcccatccattgatttggatggagggaaaagcagactagtccgagaa
gatgagaatgatgccagtgacgatgacgatgatgatgaaaagcgtcgcattgtcttctca
gtccgagagaaatcgcaaagacagaagattgctgaggaaattggtattgagggcagtgat
gatgacgctctggcaaccggggagcaggatgaagagatcagccgctgggaacaagaacag
ataaggaagggcattagcataccccaggttcaagccccacagcctgcagaagccaataat
ttgttctaccccagcacttaccaaggaataccctacaattctgcctacaacatcccttat
acttatgctgcctatggagctgctgacacaaaatttcagaaaccagataattctgtcact
tacaaaactcccagtaatgagatgactcctgtaactattgatttggtaaagaaacagctt
aaagacaggctcagtgcaatggaggacgtacacaaagcaaacctggaactttatgagaag
cacgagaaaagccaagaagactccaacaatgcaattatccgattagaagggtgctcgggg
gggaatggtgaacggtataagtttttgcaagaaatgcgagggtatgtccaagacttgctt
gagtgtttccgtgaaaaggttcctctgataaatgagcttgaatccgcaatgcaccagctg
tacaaacagcgagctgcccgccttgtccaaagacgacaagatgatataaaagatgaatct
tcggagttttcgagccattcaagtaaagctgtaatggcaccaaatctagactcttttggg
cgagatcgagcaacttatcaggagcatgcaaagcagcggaggatagcagagagagaagct
agaagagcacggaggcgacaagctcgtgaagtttctggcaagatggccgagcatcttgaa
ggcctttcaagcgatgatgaagagacctccacagacatcacaaattttaacatggagaaa
gatcgaattttaaaagaatccagcaaagtttttgaagacaccctggagaattttcattct
tttgactgtatcaaatttcagtttgacacctggcgttcgtcttattataatacatataaa
gatgcatacattgggctttgtttaccaaaactcttaaatcctcttacacgtctccagctc
ttgtcttggaaccctctggagcccaaatgttgtgactttgaaagaatggtctggtttgag
tctctgctcttttatggctgtgaagaaaaagaatttgacaaagatgatgcagacattatg
ctcttgccttccctagtggaaaaggttattcttcccagactagcagttatggcagagaac
gtatgggaccctttttctacgacgcagacaaacaggctggcagcggtgtttcagaaacta
ataaatggatacccgacagtcgtaaattcagacaacaaaaacacagaggcactactgaaa
gcactattgatgagaatgaggagaacgttggacgatgatgtgtttatgcctctctatccc
aaaaatgtgattgaaaataagaactcgggaccctgcgtgttcttccagcgtcagttctgg
tcatctgtaaagttactaggaaactttttgaagtggtatggagtcctttccaataagagc
ttacaggagctggcaatagacggactgctaaatagatacatccttatggcttttcagaat
aacgagaacggagaagacagtattaagaaagcgcagagtgttattgcatgttttccaaag
caatggttctcaggccttaaaggaggtaaaaccgttccacaactagagaactttgcccgg
tatctcactcatctggccggtgtcatctacaggcagaatataggttgctcagacatagag
aagcgaaatgcaagagaccaaatccgacagatagtaaaattgctggcgagtatccactcc
ctggaatatgcggtgtctgtggcgaacgattacaatgtgaaggacgtcaaggctccagtg
gaggcaaaataa
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