Hyla sarda (Sardinian treefrog): 130358581
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Entry
130358581 CDS
T11475
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130358581 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsq04131
]
130358581 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsq04147
]
130358581 (VPS36)
Membrane trafficking [BR:
hsq04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
130358581 (VPS36)
Exosome [BR:
hsq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130358581 (VPS36)
Exosomal proteins of colorectal cancer cells
130358581 (VPS36)
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Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
BBL5
SpmSyn_N
V-ATPase_G_2
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
130358581
NCBI-ProteinID:
XP_056417995
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Position
2:complement(69812734..69854152)
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AA seq
384 aa
AA seq
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MDRFSWCSGLLEIDETLVIQQRGVRLSDGEDKSKFESGTLLLTTHRLMWRDQKNHDFCIG
IPLSQIVFSEEQAGGIGKSAKIVVHLYSASPNKEPGPYQTSRYSYVKLSFREHGQIEFNR
RLSEELTQKRWERESPAIQMRKGPQAGRIKAVGIVGIERKLEEKRKETDKNISEAFEDLS
KLMEKAKEMVELSKSIANKIKDKQGNITEDETIKFKSYLLSMGIANPVTRETHGSGTHYH
MQLAKQLATMLQTPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEPLKLPLR
LRIFDSGVMVIELQSYNEEEMVAAALETVSERGSLTSEEFAKIVGMSVLLAKERLLLAEN
MGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttctcgtggtgctcggggctgctggaaatagacgagaccctggtgatccag
cagcggggagtgcgcctgtcagacggggaggacaagagcaagtttgagtcgggcacactt
ctcctgacaacccacaggcttatgtggcgagaccagaagaatcatgatttctgtattgga
attccactatctcagattgttttctcagaagaacaagcggggggaattgggaaaagtgcc
aaaattgttgtccatctttactctgcatctccgaacaaggaacctggaccataccaaacc
agccgctactcatatgtcaagttgtcttttagagaacatggtcaaattgagtttaatcga
cgattgtctgaggagctgacacagaagaggtgggagagggaatcacccgctattcagatg
agaaaaggtcctcaggcagggagaataaaagctgtcgggattgtaggcatcgagaggaag
ctggaagaaaaaagaaaagagactgacaaaaacatttccgaggcctttgaagatctcagc
aagcttatggaaaaggccaaggaaatggtggaactgtccaaatcgatagctaacaaaatc
aaagacaaacagggaaacatcaccgaagacgagacaataaagtttaagtcctacctactg
agcatgggaattgccaatccagtgacacgggaaacccacggatctggcacacactaccac
atgcagctcgcaaaacagcttgccacaatgttacagacccctctggaggaacgaggaggc
ataatgtcgcttaccgaagtatactgcttagtaaatcgagccagaggcatggagttgctt
tctccagaggatttggtcaatgcctgcaaaatgcttgagcccctgaaacttccactgcgg
cttcgtatttttgatagtggtgttatggtaattgagcttcaatcttacaatgaagaggaa
atggttgctgctgctttagaaacggtatctgaaaggggttcactgacttctgaagagttt
gccaagattgttggaatgtctgttttgttggccaaagaaagattgcttcttgctgaaaac
atggggcatctctgccgcgatgattcggtcgagggtctgcgcttctatccaaacctgttc
ttgacgcagagttaa
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