Hyla sarda (Sardinian treefrog): 130358770
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Entry
130358770 CDS
T11475
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq00260
Glycine, serine and threonine metabolism
hsq00630
Glyoxylate and dicarboxylate metabolism
hsq00670
One carbon pool by folate
hsq01100
Metabolic pathways
hsq01200
Carbon metabolism
hsq01230
Biosynthesis of amino acids
hsq01240
Biosynthesis of cofactors
hsq04981
Folate transport and metabolism
Module
hsq_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
130358770 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130358770 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130358770 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
130358770 (SHMT2)
Enzymes [BR:
hsq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
130358770 (SHMT2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
EF_HAND_2_PLCG
Motif
Other DBs
NCBI-GeneID:
130358770
NCBI-ProteinID:
XP_056418500
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Position
2:90018763..90091264
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AA seq
496 aa
AA seq
DB search
MLPFSLRRLAQPLRRCSHIRNQHTKPASQAGNQFWNGQESLAENDPQMWDLVQKEKDRQC
RGLEMIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQRRALEAFS
LDPEKWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDVKRISATSI
YFESMPYKLNPATGLIDYDQLEVTARLFRPKLIIAGTSAYARLIDYARMRKICDDVKAYL
LADMAHISGLVAARVIPSPFDHADVVTTTTHKTLRGARSGLIFYRKGVKSVDKKTGKEIL
YNFEDKINFSVFPSIQGGPHNHAIAAVAVALKQASSPMFQEYAAQVLKNAKAMAASLLKK
GYTLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDKSALTPGGLRLGA
PALTSRNFREADFEKVVDFIDDGIKIGLDVKSKTAKLQDFKNFLLEDQDTVHRIADLRQR
VEKFARAFPMPGFEER
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgttctcgttacggcgcctggcccagcctttaagaagatgcagccatattcga
aaccaacatacaaaaccagcatctcaagctgggaaccagttctggaacgggcaagaaagc
ttggctgagaatgatcctcaaatgtgggaccttgtacagaaggagaaggacaggcaatgt
cgtggactagagatgattgcctccgagaatttctgcagtcgagcagctttggaagcactt
ggttcctgcctcaacaacaaatactctgagggctatcctgggaagaggtattatggagga
gctgaggtggtggatcaaatagagttgctgtgtcaacgccgtgcattggaggccttcagt
ttggacccagaaaagtggggtgtaaatgtgcagccatattctgggtctccagccaacttt
gcagcatatacagctctgcttcagccacatgaccgcctcatggggcttgatcttccagat
ggagggcacttaacccacggatacatgtctgatgtcaagcgcatttctgctacctctata
tactttgaatctatgccttacaagctaaatccagctactgggttgatcgactatgaccaa
ctggaggtgacagcccgactcttccgtccaaaactcatcatcgctgggacaagcgcctat
gcaagactgatcgattatgccaggatgaggaagatatgtgatgacgtgaaggcgtaccta
ctggctgacatggcacacatcagtggtcttgtagcagcgagagttattccatctcctttt
gatcatgccgatgtggtcaccactacaacccacaagactctccgaggagccaggtctgga
ctgatattttaccgtaaaggtgtgaaatcggtggataagaaaactggaaaagaaattctt
tacaactttgaagataaaatcaacttttcagttttcccttccatccagggaggtcctcat
aaccatgcgatagcggctgtagccgtggcactaaagcaggccagttctccgatgtttcag
gaatatgccgcacaggtcctgaaaaatgccaaggccatggccgcctccctgctcaagaag
ggttacacgctggtatcaggaggtactgataaccatctggtgttagtagacctgaggccc
aagggtctggatggagcacgagctgagagggtgctggaacttgtgtctataactgctaac
aagaacacgtgtcctggtgacaagagtgctcttactcctggtggtctgaggctgggtgct
cctgctcttacgtcccggaatttcagagaggcagactttgaaaaagttgttgattttatt
gatgatggcatcaagattggtcttgatgtgaaaagcaagacagctaaattgcaagatttt
aagaacttccttttggaggaccaagacacagtacatcgcattgcagatctccgtcaacgt
gtagagaagtttgcccgtgccttccctatgccagggtttgaggagcgttaa
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