Hyla sarda (Sardinian treefrog): 130358886
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Entry
130358886 CDS
T11475
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130358886 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsq03019
]
130358886 (HNRNPA1)
03041 Spliceosome [BR:
hsq03041
]
130358886 (HNRNPA1)
Messenger RNA biogenesis [BR:
hsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130358886 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
130358886 (HNRNPA1)
Spliceosome [BR:
hsq03041
]
Common components
Common spliceosomal components
hnRNP proteins
130358886 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
DUF4715
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
130358886
NCBI-ProteinID:
XP_056418768
LinkDB
All DBs
Position
2:complement(108608020..108613583)
Genome browser
AA seq
380 aa
AA seq
DB search
MHKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGALTDCVVMRDPGSKRSRGFGFV
TYSSTDEVDAAMDARPHRVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEVYGKIEVVEIMTDRANGKKRGFAFITFEDHDSVDKIVIQKYHTVNDHNCEVRKA
LSKQEMASASASQRGRGGGGGGNFGGRGGFGGNDNYGGGRGGGGNFGGSRGGGFSGRGGY
GGDGGYNNGFGNDGGYGNNAPYGGGNRGFGGGQSYGGGQGGGYGGNGGGGYDSFNNGGGS
GSGFGGGNGNFGGNSGGGGGGYNDFGSYNNQSSSNFGPMKGGGGGGNYSGGRTSGPYGGG
SGGGYGGGSGSGNYGGGRRF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcataaatccgagtcacctaaggaaccagaacagctccgcaagctcttcatcgggggc
ttgagcttcgagaccaccgacgagagtctccgcagccattttgaacaatggggagccctg
acagattgtgtggtcatgagagatccaggctcaaagcgttcccgtggctttggctttgtc
acctattcttcaacagatgaggttgatgctgctatggatgccagacctcaccgggtagat
ggccgtgtagtggaacctaaacgtgcggtttccagagaggattcttcaaggcctggagca
catctcacagttaagaaaatatttgttgggggaataaaagaggacacagaagaacatcat
ttaagggactattttgaagtgtatggaaagatcgaggtggttgagataatgacagaccgt
gccaatggcaagaagagggggtttgcttttatcacttttgaagaccatgattcagtcgac
aagattgttattcagaaatatcacactgtcaacgatcacaactgtgaagtaagaaaggca
ctatccaagcaagaaatggcatcggcatctgccagccaaagaggacgtggtggtggtgga
ggaggaaactttggtggacgtggtggctttggtggaaatgacaattatggaggaggacgt
ggtggtggaggaaactttggcggcagtaggggtggtggttttagtggacgtggtggatac
ggaggtgatggaggctacaataacggttttggtaacgatggtggctatggaaacaacgcc
ccttatggtggtggcaatcgtggatttggtggaggccaaagttatggaggcggccaaggt
ggtggatatggaggaaatggcggtggaggctatgatagtttcaacaatggtggaggaagt
ggcagtggatttggtggaggcaatggtaactttggaggaaacagtggaggtggtggtggt
ggttacaatgactttggcagctacaataaccagtcgtcgtcaaactttggcccaatgaag
ggtggtggtggtggcggcaactacagtggaggcaggacttctggaccttacggcggtggt
agtggtggtggatatggtggtggcagtggaagcggcaattatggaggtggcagacggttt
taa
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