Hyla sarda (Sardinian treefrog): 130359858
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Entry
130359858 CDS
T11475
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130359858 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsq03021
]
130359858 (SMARCA5)
03036 Chromosome and associated proteins [BR:
hsq03036
]
130359858 (SMARCA5)
Transcription machinery [BR:
hsq03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
130359858 (SMARCA5)
Chromosome and associated proteins [BR:
hsq03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
130359858 (SMARCA5)
RSF complex
130359858 (SMARCA5)
WICH complex
130359858 (SMARCA5)
B-WICH complex
130359858 (SMARCA5)
NORC complex
130359858 (SMARCA5)
BRF complex
130359858 (SMARCA5)
NuRF complex (fruit fly)
130359858 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
RRG8
AAA_14
Motif
Other DBs
NCBI-GeneID:
130359858
NCBI-ProteinID:
XP_056418859
LinkDB
All DBs
Position
1:complement(151923554..151955353)
Genome browser
AA seq
1044 aa
AA seq
DB search
MSEESAEPRKEPAGGEKEEERMTVEEAGDAGGKKPQQPEDEAAVKEEQESSKEENDSLNK
TKESNEMDPDYEEKRKEDRSNRFDYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRLKK
DEKQNLISAGDNRHRRTEQEEDEELLTENSKSTNVCTRFETSPSYVKGGTLRDYQVRGLN
WLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLHNWMAEFK
RWVPSLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDE
AHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWF
DTNNCLGDQKLVERLHLVLRPFLLRRIKAEVEKSLPPKKELKIYVGLSKMQREWYTKILM
KDIDILNSSGKTDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLE
KLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWKNFEYCRLDGQTPHDDRQESILAFNAPG
SSKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFIT
DNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEI
TDEDIDGILERGEKKTAELKEKLSNMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTE
WIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEI
LYYRKTIGYKVPRNPELPNAAQAQKEEQLKIDEAEPLNDEELDEKEKLLTQGFTNWNKRD
FNQFVKANEKWGRDDIENIAREVEGKTPDDVMEYSAVFWERCNELQDIEKIMAQIERGEA
RIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENV
YDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENLELEEKEKAEKKKRGPK
TSSAQKRKMDGAPDGRGRRKKLKL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggaaagtgccgagccacggaaagagcctgccggcggagagaaggaagaagag
aggatgaccgtggaggaggcgggggatgctggcgggaagaagccgcagcaacctgaagat
gaagccgccgtcaaggaggaacaggagtctagtaaagaagagaatgactcccttaataaa
acaaaagaaagtaatgaaatggatcccgattatgaagaaaagaggaaagaagaccgctcc
aacagatttgattaccttctgaagcaaacagagttgtttgcacattttatccaaccagca
gcacagaagactccaacatctccattaaaaatgaagcctggtcgtcctaggttaaagaaa
gacgagaagcagaatctgatatctgctggggataaccgacatcggagaactgagcaggaa
gaggatgaagaacttttaactgaaaactcaaagtctactaatgtttgcacccgatttgaa
acgtcaccatcatatgtgaaaggtggaacattaagggattatcaggtcagaggcttgaac
tggcttatatcattgtatgagaatggcatcaatggtatcctggctgatgaaatgggtctt
ggcaagactctgcagactattagtcttcttgggtatatgaaacactacaggagcattcct
ggcccgcatatggtattagttcccaagtctaccttgcataattggatggctgaattcaaa
agatgggtcccttccctacgtgcagtttgtcttattggagacaaggatcaaagagctgct
tttgtccgtgatgttcttttgccaggggagtgggatgtttgtgtgacttcatatgaaatg
cttattaaggaaaagtctgttttcaagaagtttaactggcgatacttggttattgatgaa
gctcacagaatcaagaacgaaaaatctaagctgtctgaaattgtgagagaatttaagact
acaaatcgtctcctcctaactggaactccccttcagaataacttacatgaactttgggca
cttttgaattttttgcttccagatgtatttaactcttcagaggattttgactcttggttt
gataccaacaactgtcttggggatcagaaactagtggagcgtcttcatttggtgttgcgg
cctttccttctgcgacgtataaaagctgaagtggagaagagtcttcctccaaagaaggaa
cttaaaatctatgttggcctgagtaagatgcagagggaatggtatacaaagattttgatg
aaagacattgacattttgaactcatcaggaaagactgataaaatgaggctgctgaacatt
ctgatgcagctgagaaagtgttgcaatcatccttacctttttgatggtgctgagcctggg
ccgccgtataccacagatatgcacttagttacaaatagtggtaaaatggttgtgttagaa
aagcttctccctaagctaaaagagcaaggttctcgtgtgctgatattcagccagatgaca
agagtcttggatatcttggaagattactgcatgtggaaaaactttgaatattgccgcttg
gatggacaaactccacatgatgacagacaagaatccatcttggcttttaatgctcctggc
agttcaaaattcctttttatgttgagcacacgtgctggtggacttggaattaatcttgct
acagctgatgttgtcatcatttatgattctgactggaaccctcaagtagatcttcaagcc
atggacagagcacacagaattgggcagacgaaaactgtaagagtgtttagattcataaca
gacaacacagttgaagaacgtattgtggagagagcagaaatgaaactccgtttggattcc
atagtgattcagcaaggaaggttagtcgaccaaaacttaaataagctaggaaaggatgaa
atgcttcagatgatcagacatggtgctacccacgtgtttgcttcaaaggacagtgaaatc
actgatgaagatattgatggtatcttagaaaggggtgaaaaaaagacggcggagctcaaa
gaaaaactttcaaacatgggtgaaagttcactgagaaacttcactatggatacagagtcc
agtgtatataattttgaaggtgaagattacagagaaaagcaaaagatggcatttacagag
tggattgaaccaccaaagcgtgaaagaaaagccaactatgcagtggatgcttattttaga
gaagcacttcgtgtcagtgagcccaaaatacccaaagctccacgaccaccaaaacagccc
aatgttcaggactttcagttctttcctccacgattgtttgaattactggagaaagaaatt
ctctattataggaaaacaattggttataaggtacctcgaaatccagaattgccaaatgca
gcccaggcacaaaaggaggaacagttaaaaatcgatgaagcagaacctctgaatgatgaa
gaactggacgaaaaggagaagttgctaacacagggtttcaccaattggaacaagagagat
ttcaatcagtttgtaaaggccaatgaaaaatggggaagggatgacattgaaaatattgcc
cgtgaagtggagggcaaaactccagatgatgtaatggagtattcagcggtgttctgggaa
agatgcaatgaactacaagacatagagaaaataatggctcaaatagaaaggggagaagca
agaatacagaggagaataagtataaagaaagcattagacacaaagattggacgttacaag
gcaccgttccatcagttgaggatatcttatggcaccaacaaaggaaaaaattacacagag
gaggaagatcgttttcttatctgcatgttgcacaaacttggttttgataaagaaaatgtt
tatgacgaacttaggcagtgcatcaggaactctcctcagttcagatttgactggttcctg
aagtcaaggactgcaatggaactacaaagaaggtgcaacactctgatcactttaattgaa
agggaaaaccttgagttggaggagaaggaaaaagcggagaaaaagaaacgtggaccaaaa
acttcttcagctcagaaacggaaaatggatggcgctccagatggcagaggtagaaggaag
aagctcaagctttaa
DBGET
integrated database retrieval system
