KEGG   Hyla sarda (Sardinian treefrog): 130361211
Entry
130361211         CDS       T11475                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
hsq  Hyla sarda (Sardinian treefrog)
Pathway
hsq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130361211 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsq03041]
    130361211 (CDC5L)
   03400 DNA repair and recombination proteins [BR:hsq03400]
    130361211 (CDC5L)
Spliceosome [BR:hsq03041]
 Complex B
  Other components
   Prp19 complex
    130361211 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    130361211 (CDC5L)
DNA repair and recombination proteins [BR:hsq03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    130361211 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 130361211
NCBI-ProteinID: XP_056419917
LinkDB
Position
3:complement(26764517..26818769)
AA seq 804 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEEAADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSEENYDALNADFR
KLRQQDLDGELRSEKEAKERKKDKQNIKRKKESDLPAAILQTTGGVSELTKKRSKLVLPS
PQISDAELEEVVKIGQASEIARQTAEESGITNSASSTLLSEYNVANNSIALRTPKTPAAQ
DRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSQS
SEGLTPRGGMTPKPVIGATPGRTPLRDKLNINPEDGSVDYNDPTYIKHLERESQEQLRLG
LMSLPAPKNDFEIVLPENAERELEEREQEDSFIEDASDVEAQKQALRDAQRAKELKQRHK
AVQKALPRPSEVNETVLRPANVEPPLTDLQKSEEMIKKEMTTMLHHDSLHHPYGDNAGGK
KAKAPGAVPTSVEHVAYLEQNSYDKFTEDELQHAEELLQQEMEVVKQGMGHGDLSLDAYN
QVWEECYSQVLYLPGQGRYTRANLASKKDRIESLEKRLEVNRGHMTAEAKRAAKMEKKLK
ILLGGYQSRAMGLIKQLNEIWDQYEQANLELKTFEELKKHEDIAIPRRIASLKEDVQRQE
ERERELQQRFAELLLEKEGSVPKY
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgccgcgtattatgataaagggaggggtgtggaggaacacggaggatgaaatcctcaag
gcggcggttatgaaatatggcaaaaaccagtggtctcgtattgcgtccctactgcacagg
aagtccgccaagcagtgtaaagcccgatggtacgaatggctggatcccagtattaagaag
acagaatggtcacgtgaggaggaagagaagctgctgcatttggccaagctgatgcccaca
caatggaggacgatcgccccgattattggcaggacggccgcccagtgtctggagcactat
gagtttttactagataaagcagcgcagagggacaatgaagaggaggcggctgatgaccct
cggaagcttaaaccgggagaaatcgacccaaatcctgaaaccaaacccgccaggccggac
ccagtggacatggacgaagatgagctggagatgttatctgaggccagagctcgtcttgct
aacacccagggtaaaaaggccaagaggaaagcgagagagaagcagctggaggaggccagg
cgtttggcggctcttcagaagaggcgagagctgcgggcagcaggaatcgagatacagaag
aaaaggaaaaagaagcgtggcgtagattacaatgctgagatcccgttcgagaagaagccg
gccccgggcttctatgacacctccgaggagaactatgatgcactaaacgcagacttcaga
aaactgaggcagcaggacctggacggagagcttagatctgaaaaagaagcaaaagaacga
aagaaagacaaacagaatataaagaggaaaaaggagtccgacctgccggcagcaatcctc
cagaccaccggcggggtgtccgaactgaccaagaagaggagcaagttggttctaccatct
cctcagatttccgatgcagagttggaagaagtggtgaagatcggacaagccagtgagatc
gcccggcagacggcagaggaatccggaatcaccaattctgcatccagcaccttactatct
gaatacaatgttgcaaataacagcatcgccctcagaacgccaaaaacaccggccgcccag
gaccgcattctgcaggaggcacagaacttgatggcacttacaaatgtggacacccccttg
aagggtgggctcaacaccccactgcacgagagcgacttctccggtgtcacaccacagaga
caagtagttcagactcccaatactgtgctgtcaacaccattcagaaccccatctcaaagt
tcagaaggattaaccccgagaggtggcatgacccccaagccagttattggagccacacca
ggaaggacaccattacgggacaagctgaacatcaatccagaggatggatcggtggattac
aatgatcctacttatattaaacatctggaaagggagtctcaggaacagctacgtcttgga
ctaatgtctctgccggccccgaaaaatgactttgagatcgtcctgccagaaaatgctgag
cgagagctggaggaacgagaacaagaagactccttcatagaagatgcctcagatgtggag
gcgcagaaacaggcacttagagatgcacaacgggcgaaggaactgaagcagagacacaaa
gctgtgcagaaagccttaccaagaccctctgaagtaaatgagaccgttctgagacctgcg
aatgtagagccgccccttactgacctgcaaaaaagcgaagaaatgatcaagaaggagatg
accacaatgctgcaccacgactccctgcatcatccgtacggagacaatgctgggggcaag
aaggccaaagcccctggtgctgtccccacaagcgtagaacatgtggcatatctggagcaa
aattcatatgacaagttcacagaagatgaactgcagcatgcggaggagctcctgcagcaa
gagatggaggtggtgaagcaaggtatgggccacggagacctgtccctggacgcctacaac
caggtgtgggaggaatgttacagtcaggtgctttacctccctggacaaggccgatacacc
cgagccaacctggccagcaagaaggaccgcatcgaatctctggagaagaggctggaggta
aacagaggtcacatgactgcggaagccaaaagagcagcgaagatggagaagaagctgaag
attctgttgggcggttaccaatcccgagcaatggggcttataaaacagctcaacgaaatc
tgggatcagtatgaacaggccaacctggagctgaagacgtttgaggagctgaagaagcat
gaggatatcgccatccccaggaggatagcgtcccttaaagaagatgtgcagcggcaggag
gaaagagagcgggagcttcagcagcggtttgcagaacttcttctggagaaggaaggttcg
gttcccaaatactaa

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