Hyla sarda (Sardinian treefrog): 130362765
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Entry
130362765 CDS
T11475
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04517
IgSF CAM signaling
hsq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130362765 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130362765 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsq04812
]
130362765 (SPTBN1)
Cytoskeleton proteins [BR:
hsq04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130362765 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
130362765 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
130362765
NCBI-ProteinID:
XP_056423726
LinkDB
All DBs
Position
3:368194073..368391227
Genome browser
AA seq
2361 aa
AA seq
DB search
MTAVATDFDNIEIQQQYSDVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTFTK
WVNSHLARVSCRITDLYADLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKALQF
LKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLW
CQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAE
QHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEK
MIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNL
EVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLEQ
LARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVV
AVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKVFQEMLYIMD
WMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQRFATEGEGYK
PCDPQVIRDRVAHMEFCYQELCQLAAERQARLEESRRLWKFFWEMAEEEGWIREKEQILS
SDDYGKDLTSVIRLLCKHKAFEDEMSGRSGHLLQTIKEGEEMVAEEHFGSEKIRERIKDI
QEQWANLEQLSAIRKKRLEETSSFHQFQADADDIDAWMLDILKIVSSSDVGHDEFSTQSL
VKKHKDVAEEIGSYRSTIDALHEQAAALPEEQFEASEVQSRLSGIEERYKELAELTRLRK
QALQDALALYKMFSEADACELWIVEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQA
SRVAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFRELVDRTKDSLSSALSIQNYHL
ECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLAAIEAKLTDLQKEAEKL
EAEHPDQAQAIMSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQ
TAIASEDMPNTLAEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQ
RLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPNNLE
AAEAAIKKQEDFMTTMDASEEKINAVVETGRRLVNDGNINSDKIEEKVESIDSRHKRNRE
AANDLLTRLKDNREMQKFLQDCQELSLWVNEKMLTARDMSYDEARNLHSKWLKHQAFMAE
LASNKEWLDKIEKEGNQLIAEKPETEAVVKEKMIALYKMWEDLESTTQTKAQRLFDANKA
ELFTQSCADLDKFLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEVEELQSQ
AQALSQEGESTDEVDSKRIVVQQKFVQLLAPLNERKKYLMASKEIHQFNRDVEDEILWVE
ERMPVATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQHRYDDIFERSDKILEDANLNAEPI
NQRLADLQTLWNQLIEETEKRHRRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKD
EQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADGHPESERISMRQSQVDKLYAGL
KDLSEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREF
ARDTGHIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAA
SYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQL
QEDATRLQAAYAGDKADDIQKRESEVLEAWKSLLDACEGRRLRLVDTGDKFRFFSMVRDL
MLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTSCIELGKSLLARKHY
ASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSR
EIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRMQEEEERKRKPPTP
ELSPKVSEEGESPQQWDGTKEGEQISQNGLPSDQDSPRMAENADTNEMVNGSTEQRSSSK
ESSPIPSPTADRKSKSGMLPQTASTLPAKTQDLPSAQFEGFLHRKHEWEAHNKKASSRSW
HHVYCVINNQEIGFYKDSKTAASGITYHNEIPMNLKESVCEVATDYKKKKHVFKLKLNDG
NEYLFQAKDDEEMNTWIQAISNAILADKTEVSLSTQSTPASSRAQTLPASVTVTTESSPG
KREKDKEKDKEKRFSLFGKKK
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgtcgcaacagactttgacaacattgagatacaacagcaatacagcgatgtc
aacaatcgctgggatgacgaatgggacaatgagaacagctccgccaggctcttcgagcga
tcccgcatcaaggcattagcagatgaacgtgaggctgtccaaaagaaaaccttcacaaaa
tgggtcaattcacacctggcccgagtttcctgcagaattactgatctgtacgcagacctc
agagatggacggatgcttatcaaactattggaagttctctccggagaaaaacttcccaag
cccaccaagggaagaatgcgtatccactgtctggagaatgttgataaagctctgcagttt
ttgaaagaacagagagtccatctagagaacatgggatcacatgatattgttgatggaaac
cacagactgactcttggccttatctggaccatcatcctcagattccagattcaagatatc
agtgtagaaacagaggacaacaaggagaagaagtctgctaaggatgcattgcttttatgg
tgccagatgaagacagctgggtatccgaatgtgaatatacataactttacaaccagctgg
agagatggcatggcattcaacgcactcattcataaacacaggccggatctaattgatttt
gacaagttgaagaagtctaatgcacactacaatcttcagaatgccttcaaccttgcagag
cagcacctcggactcacaaagctattggaccccgaagatatcagtgtggatcatcctgat
gaaaaatcaatcatcacatatgttgtcacatactatcattacttctcaaaaatgaaggct
ctagctgtggaaggaaaacgtattggaaaagttctagataatgccattgaaaccgagaag
atgattgaaaaatatgaatccctggcctctgacctcctcgaatggattgaacaaaccata
atcatcctgaataatcggaaatttgccaactcactggttggtgtgcagcagcagcttcag
gcttttaacacctaccgcacagtggaaaaaccaccaaaatttacagagaaaggcaacttg
gaagttttgctctttactattcagagtaagatgagagcgaacaaccagaaagtgtacatg
ccaagagagggcaagctcatctccgatattaataaggcctgggaaagactggaaaaagct
gaacatgaaagagaactggcactgcgaactgagctaatccgacaggagaaactggaacaa
cttgcacgaagatttgaccgcaaagcagctatgagagagacctggctgagcgaaaaccag
cgcctggtgtctcaggataactttgggtttgatctccctgctgtggaagccgccactaag
aaacatgaagccatcgagaccgacattgccgcctatgaagagcgtgtgcaggccgttgtg
gcagtggcacgagaactggaagccgaaaactaccatgacataaaacgcatcactgcacgt
aaagataatgtcatcagactttgggaatatctgttggagctactgcgtgcaaggcgacaa
cgcctggaaatgaaccttggattgcagaaggttttccaagagatgctctacattatggac
tggatggacgagatgaaggtgttactattgtctcaggattatggaaagcatttgttgggg
gtcgaggatttgttacagaaacatgccttggtagaagcagacattgccattcaagcagag
agagtacgaggggttaatgcatctgcccagagatttgccaccgaaggagaaggttataaa
ccgtgtgacccacaagtcatccgggatcgcgtggctcacatggagttttgctaccaagaa
ctgtgtcagctggcagccgaaagacaagcacgtttggaagagtctaggcgtctttggaag
tttttctgggaaatggcagaagaggagggatggataagagagaaggagcagatcttgtct
tctgatgactatgggaaggatttgaccagtgtcatccgtttgctttgcaaacataaagca
tttgaagatgagatgagtgggcggagtggtcacctcctgcagaccatcaaggaaggtgag
gagatggttgcagaagagcactttggatctgagaagataagagagagaataaaagatatt
caggaacagtgggctaacctcgagcagttgtctgctattcggaagaaacgtctggaagaa
acatccagcttccatcagttccaagcagatgctgatgacattgatgcttggatgctggac
atcttgaagattgtgtctagcagtgacgttgggcatgatgaattctctacacagtctcta
gtaaagaaacacaaagacgtagcagaggaaataggaagttacagatcaactattgatgca
ctacatgagcaagcagccgccctacctgaggaacagtttgaggcttcagaagtacagagc
agattgtctggaatagaggagagatacaaggaactggctgagctgacaaggcttcggaaa
caggcccttcaggatgctcttgctctctataagatgtttagtgaagctgatgcttgcgag
ctttggattgttgaaaaggagcaatggcttaacaatatgcaaatacctgagaaattggaa
gatctggaggttattcagcacagatttgagagcttggaaccagaaatgaacaaccaggct
tcccgggtggctgtagtcaaccagattgcccgccagctgattcatagtggacatccaagt
gagaaagaaatcaaagcacagcaagacaaactgaacaccagatggagtcagttcagagaa
ttggtggatcgaacaaaagattcccttagttcagcccttagtattcagaactaccacctt
gagtgcaatgagaccaagtcatggataagggaaaagaccaaagtcattgagtccactcag
gagctgggcaatgacctggctggagttatggctctccagaggaaattgacaggcatggaa
cgtgatttagctgctattgaagccaaattgactgatctccagaaggaagctgagaaactg
gaagctgaacacccagatcaggctcaggccatcatgagtagacttgcagagattaatgac
gtttgggaagagatgaaaactaccttgaagaacagagaagaatctcttggtgaagccagc
aagctccaacaattcctgcgcgacttagatgacttccaatcctggttatcaaggacccag
acagctatagcctcagaagatatgccaaacactttagccgaggcagaaaagttacttacc
cagcatgagaatatcaagaacgaaattaacaactatgaggaagattaccaaaagatgaga
gacatgggcgaaatggtgacacaaggacagacagatgcacagtacatgttcttgcgccaa
cgtctccaggctctcgatactggatggaatgagcttcacaaaatgtgggagaacaggcaa
aatctcctaagccagtcccatgcctaccaactcttcttaagggatacaaagcaagcagaa
gctttccttaataaccaggaatatgtcttggcccacactgagatgccaaataacttggaa
gctgccgaagctgccataaagaaacaggaagacttcatgaccaccatggatgccagtgag
gagaaaatcaatgcagtagtagagactggaaggagactggttaatgatggcaacataaac
tctgataagattgaagaaaaggttgaatcaattgacagcagacataagagaaaccgagaa
gcagcgaatgacctcctaacacggctgaaggacaaccgagagatgcagaagtttctgcag
gattgccaagagctgtccctctgggttaatgagaaaatgctcactgctcgagatatgtcg
tatgacgaggccagaaacttgcatagtaaatggctgaaacaccaagcgtttatggcagaa
ttggcttccaacaaagaatggcttgacaaaatagaaaaggaaggaaaccagctcattgca
gagaagccagaaactgaagccgtagtgaaggagaagatgatagccttgtataagatgtgg
gaagatcttgaatccactacacagacaaaggcccagagactttttgatgccaacaaagct
gaactttttacccagagttgcgcagatttggacaagtttctccatggcttggagagtcag
attcagtctgacgattatggaaaggatctgaccagtgtcaatatcctcctgaagaagcag
cagatgctagaaaatcagatggaggtccgaaagaaggaggtggaagagcttcagagccaa
gcccaagctctcagccaggagggagagagcacggatgaagttgacagcaagcgtatcgtg
gtgcagcagaagtttgtccagctgcttgctcccttaaatgagcggaaaaagtacctaatg
gcctccaaagagatccatcagttcaatcgggatgtggaggatgagattctttgggttgaa
gagagaatgcctgttgcaacatcgactgaccatgggcacaacctccagactgtacagctg
ctgataaagaagaatcagactcttcagaaggagatccaaggccaccagcatcgctacgat
gatatctttgaaaggagcgacaagattctggaagacgccaaccttaatgcagagccaatc
aatcagcgactggcagatcttcagactctatggaaccagctcattgaggaaacagagaag
agacacaggcggctggaagagtcacacaaggcgcagcaatactacttcgatgctgctgaa
gcagaggcctggatgagcgagcaagaactttacatgatgtctgaagagaaagcaaaggat
gaacagagtgctgtgtcgatgctgaagaagcaccaaatactggagcaggcggtggaggat
tatgcagagactgtgcaccagctttccaagacaagcagggctttggtggcagatggacat
ccagaaagtgagcgtatcagcatgcgtcagtcccaagtggataaactttatgcaggtctg
aaagatttgtctgaggagaggagaggaaaactggatgaacgacacaggctgttccagctc
aaccgtgaagtggatgacctggagcaatggattgcggagagggaagtcgtggcaggttcg
catgagttgggtcaggactacgaacatgttacaatgttgcaggaaaggttcagggagttt
gcacgtgatactggccacattggacaggaaagagtggatactgtcaatcacatggcagac
gaccttattaattcaggacactctgatgctgctactatagcagaatggaaggatggtctc
aatgaggcctgggcagacctcctcgaactgattgataccagaacacagatactggctgcc
tcatatgaactgcataaattctaccacgatgctaaagagatctttggacggatacaagac
aagcataagaagcttccggaggagcttggtagggatcagaacacggtagaaacactacag
agaatgcacacaaccttcgagcatgacatccaggccttgggcacacaggtgaggcaacta
caagaagatgccacacgactgcaggctgcatacgcaggagataaagccgatgatattcag
aagagggagagcgaggttctggaggcctggaagtccttgctggatgcgtgtgaaggacgg
cggctcagattggtggacacaggtgataaattccgattcttcagcatggttcgtgacctt
atgctctggatggaagatgtcatccgccagattgaagctcaagagaagccaagggatgtt
tcttcagtagaattactaatgaataatcaccaaggcattaaagctgagattgatgcccgg
aacgacagctttacgtcatgcattgagcttggcaagtctctcttggcaagaaagcactat
gcatcagaagagataaaagaaaagttactgcagctgactgagaagagaaaagagatgatt
gacaagtgggaggaccgctgggaatggctaagactgattttggaggtgcaccagttttcc
cgagatgccagtgttgccgaggcctggttattgggacaggagccatatctgtcaagtcgt
gaaataggccagagtgtagatgaagtggaaaaactcatcaaacggcatgaagccttcgag
aagtctgcggctacttgggatgaaaggttttccgctctggaaagacttactacgttggaa
ttgttggaagtacgtcgaatgcaggaagaagaggagaggaagaggaaaccccccactcct
gagcttagtcctaaagtttcagaagaaggggagtccccacaacaatgggatggaacaaaa
gaaggtgaacaaatttcccaaaacggcttgccatctgaccaagattcaccacggatggca
gaaaatgctgacaccaacgaaatggttaatgggtccacagagcaaaggtcaagttcaaaa
gaatccagtccgatcccctcaccgactgctgaccgtaaatcgaaatcaggcatgctgccg
cagaccgcctccactctaccagccaagacgcaggaccttccttctgctcagtttgaagga
ttcttgcatcgcaaacatgaatgggaggcacataacaagaaagcctccagcagatcttgg
caccatgtatattgcgtgatcaataaccaagagattggattttataaagactccaagact
gctgcatctggtattacctaccacaatgaaatcccgatgaatctgaaggaatcggtctgt
gaagtagccactgactataagaagaaaaaacatgtgttcaagctgaaactgaatgatggt
aatgagtacctcttccaagccaaagatgatgaggaaatgaacacatggatccaggccatc
tcaaatgcaatcttagccgataaaacagaggtgtctctgagcacgcagagcactccagca
tccagccgggcccaaactctgccagccagcgtaacggtcaccacagagtccagccctggc
aagcgggagaaggacaaggagaaagacaaggagaagagattcagcctctttggaaaaaag
aagtga
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integrated database retrieval system
