Hyla sarda (Sardinian treefrog): 130367755
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Entry
130367755 CDS
T11475
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130367755 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsq03021
]
130367755 (SMARCA4)
03036 Chromosome and associated proteins [BR:
hsq03036
]
130367755 (SMARCA4)
Transcription machinery [BR:
hsq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130367755 (SMARCA4)
Chromosome and associated proteins [BR:
hsq03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
130367755 (SMARCA4)
Chromatin remodeling factors
BAF complex
130367755 (SMARCA4)
PBAF complex
130367755 (SMARCA4)
GBAF(ncBAF) complex
130367755 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
130367755
NCBI-ProteinID:
XP_056426458
LinkDB
All DBs
Position
4:complement(34438468..34498616)
Genome browser
AA seq
1627 aa
AA seq
DB search
MSTPDPPMGGTPRPVQSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPIPPQGPSGYP
PENMHQMHKPMESMHEKPMPEDPRYNQMKGMAMRPGGHAGMGPPPSPMDQHSQGYPSPLG
SSEHVASPVPSNGPPSGPLPSGSGGVNMENADPQQPQQQPQQQTSRSPTPFNQNQLHQLR
AQIMAYKMLARGQPIPDQLQMAVQGKRPLPGMQPQMTTIPPPAASGTGPVPAPGPAPPSY
NRPHGMAGPAMPPPGPSGAPPVMPGHPPGAPLKPWPEGPMANAAAPATAPQKLIPPQPTG
RPSPAPPAVPPAASPVMPPQTQSPGQPAQPPPMVQFHPKANRITPIQKPRGLDPVEVLQE
REYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTA
LETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEF
HRSVTGKVQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR
LAYLLQQTDEYVANLTELVRQHKAAQVLKEKKRRKKKKTPENAEGQQPVLGPDGEPLDET
SQMSDLPVKVMHVESGKILTGADAPKAGQLEAWLEMNPGYEVAPRSDSEESGSDEEEEVR
DLLREEEEQTAPPVASVPSVEEKKIPNPDSDDVSEIYAREIIESAKQDVDDEYSQQVEAG
LQSYYAVAHAVTERVDKQSTLLVNGILKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI
QTIALITYLMEHKRINGPFLIIVPLSTLSNWVYEFDKWGPSVVKVSYKGSPAARRAFVPI
LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRL
LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRR
LHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGILLTDGSEKDKK
GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGQDLYRASGKFELLDR
ILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS
EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV
NSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERKAFLQAILEHEEQDEVCTDSDQRD
RWGGKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSW
IIKDDAEVERLTCEEEEEKMFGRGSRNRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQ
KKTTRKRKRDVDPPCTPTTSTRNREKEDDGRKKKRGRPPAEKLSPNPPNLTKKMKKIVDA
VIKYKDRLNDSVSYLSGSGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRNHKY
RSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESEGDDSEEDE
EAEEEGSESESRSVKVKIKLGRKEKMQERMKGRRRTSRGCRAKPVVSDDDSEEDQEEDRS
GSGTEDD
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctgatccgcctatgggcggtacccctaggcccgtccagtcccctggtccg
ggcccatctcctggtgctatgctgggccctagccctggcccatctcctggatctgcacac
agcatgatgggaccaagccctggaccaccaattccccctcaaggacccagtggatatcct
ccagaaaacatgcaccagatgcataagcccatggagtccatgcatgagaagcctatgccg
gaggacccacgttataaccagatgaagggaatggcgatgcggcctggtggccatgctggt
atggggccaccaccaagtccaatggaccaacactcacaaggttacccctcaccactgggc
agctctgaacatgtcgcaagcccagtgccctctaatggccctccctctgggccgttgcct
tctggttcaggtggagtgaacatggagaacgcggatcctcagcagccacagcagcagccc
cagcagcagacgagccgcagcccaacaccgtttaatcagaaccagctgcaccagttgcgg
gcgcagataatggcgtacaaaatgctggccagagggcagccaatacctgatcaactacag
atggcggtacaaggcaagaggcctttgccaggcatgcagccacagatgacgacaatacct
ccacctgcagcttctgggactggacctgtgcccgccccggggccagcaccacccagctac
aacagacctcacggaatggctggaccagccatgccacctccaggaccttcaggtgcccct
cctgtaatgccagggcatcctcctggggcaccccttaagccctggcctgaaggtcccatg
gccaatgctgcggcgcccgctactgcacctcagaagttgattcctccacagccaactggt
cgcccttcacctgcacccccagcagtgccacctgcagcgtctcccgtcatgccaccccag
acacagtccccgggtcagccagcccaacccccacctatggttcagtttcatcccaaagcc
aatcgtattactcctatccaaaaacctagaggcttggatccagtcgaagtgctacaagaa
cgtgaatatcgacttcaggctcgcattgcacataggatccaggaattggagaatctccca
gggtctttagctggtgaccttaggaccaaagcaacaatagaactaaaagctctgagactc
ctaaacttccaaagacagctccgacaagaggttgtggtctgtatgaggagagacactgcc
ctggaaactgctttgaatgccaaggcttacaagcgaagcaagcggcagtctctacgtgag
gccaggatcacagagaagctggagaaacagcagaagattgagcaggaacgcaagaggcgg
caaaagcaccaggaatatctgaatagcatcctccagcatgcgaaggacttcaaggagttc
caccgctctgtcacagggaaggtccagaaactgaccaaggctgtggccacgtaccatgcc
aacacggagcgagaacagaagaaagagaacgagaggattgagaaggagagaatgcgtcgt
ctcatggcagaagatgaggagggctacaggaagctgattgaccaaaagaaggacaagcgc
ttggcctacctcctgcagcagaccgacgagtacgtggccaacctgacggagctggtgagg
cagcacaaagctgcccaggtactaaaggagaagaagaggaggaaaaagaaaaagacacca
gagaatgcagaaggacaacagcctgtacttggccctgacggagagcctttggatgagacc
agccagatgagcgaccttcctgtcaaagttatgcatgtagaaagcgggaagatcttgact
ggtgcagatgctccaaaggcaggacagctagaagcctggctggagatgaatccgggatat
gaagttgctccgagatctgacagcgaggagagtggatccgatgaggaggaggaggtgaga
gatctgcttagagaagaggaggagcagacagcgccccctgttgcctctgtaccttcagtg
gaggagaagaagattcccaacccggatagtgacgatgtttcggaaatctacgctcgagag
attatcgagagtgccaagcaggacgtggatgacgagtacagtcagcaggttgaggccggc
ctgcagtcatactacgctgtagctcatgctgtgactgagagggtagataagcagtccact
ctgctggtcaatggaatcctcaaacagtaccagatcaagggtctggagtggctggtctct
ttgtacaacaataacctgaatggtatcctcgctgatgaaatgggtctggggaagactatt
cagaccatcgctctgatcacatacctcatggaacacaagcgcatcaatggccccttcctc
atcatagttcctttatcgacactgtctaactgggtttatgagtttgacaagtgggggcca
tctgtggtgaaggtgtcctacaaggggtctcctgctgctcgtcgcgcttttgttcctatt
ctccgtagcggaaagtttaacgttctcctcactacatatgaatacattattaaggacaag
cacatcctggccaagatccgttggaagtacatgattgtagatgaaggtcaccgcatgaag
aaccatcactgtaagctgacacaggtccttaacacccattatgtggccccgcgtcgctta
ctgctcaccgggacgcctctgcagaacaagctgccggagttgtgggctcttctgaacttc
ctgctcccgaccatcttcaaaagctgcagcacctttgagcagtggttcaatgctcctttt
gccatgactggagagaaggtggatctaaatgaagaagaaaccatcctgatcatccgccgt
ctgcacaaggtgctgcgtcccttcttactgcgcagactaaagaaggaggtggaggctcag
ctgccagagaaggtggaatatgtgatcaaatgtgacatgtctgcattacaaagggtcttg
tacaggcacatgcaggccaagggcattctcctcacagacggatcagagaaggacaaaaag
ggtaaaggtggtaccaagaccctcatgaataccattatgcagcttagaaaaatctgcaac
cacccatacatgttccaacacatagaggaatccttttctgaacacttgggtttcacagga
ggcattgtgcaggggcaggacctctaccgggcctctggaaagtttgagctgctagaccgc
atccttcccaagcttcgagccaccaaccacaaagtcctgctcttctgtcagatgaccaca
ctcatgacaatcatggaagactactttgcttatcgtggctttaaatacctcagattagat
ggaaccacaaaagcagaagaccgtggtatgttactgaagacctttaatgagccaggttca
gaatacttcatcttcctgctcagtacccgtgcaggtggtttaggtcttaacttgcagtct
gctgacacggttatcatatttgacagtgactggaatccgcatcaggatttgcaggcccag
gatcgggctcatcgtattggacagcagaacgaggtacgagtgttgcgtctgtgcacagtg
aacagtgtggaagagaaaatcctggcagcagctaagtacaagctgaatgtggaccaaaaa
gtcatccaggctggaatgtttgatcaaaaatcatccagccacgagaggaaagcgttcctg
caggccatcctggaacacgaggagcaggatgaggtgtgtacggattctgaccagcgcgac
agatggggagggaaggaagaagatgaggtaccagatgatgaaacggttaatcagatgatt
gccagacacgaggaagaatttgatttgtttatgagaatggatctagacaggcggcgagaa
gaggcccgcaatcctaaacgcaagccccggttaatggaggaggacgagcttccatcctgg
atcattaaagacgatgctgaagttgaacgtctgacatgtgaagaggaggaggagaagatg
tttggacgtggatcccgtaaccgaaaggaagtggactacagcgactccctgactgagaag
cagtggctgaaggccattgaggaaggtactttagaggagatcgaagaggaggtacgtcag
aaaaagaccacccgtaagcgcaaaagagatgtggaccccccctgcaccccaactaccagc
acgcgaaacagggagaaggaggatgatgggaggaagaaaaaaagagggcgacctccagca
gaaaagctttcccccaaccctcccaacctcaccaagaaaatgaagaagatcgtagatgcc
gttatcaagtataaggacaggcttaatgactctgtctcctatcttagtggcagcggacgg
cagcttagtgaagttttcatccagcttccatctcgtaaagaactcccagagtattatgag
ctgatccggaagccggtggacttcagaaagattaaggagagaatcaggaatcataagtac
cgcagtctgaatgatctggagaaggatgttatgctgctctgtcagaatgcgcagaccttc
aacctggagggctccctgatatacgaagactccattgtgttgcagtcagtctttactagt
gttaggcagaagattgagaaagaggaggaaagtgagggagatgatagcgaagaagacgag
gaagcagaggaggaagggtcagaatctgagtctcgctcagtcaaagtgaaaattaaactc
ggacgtaaggagaagatgcaggagcggatgaaggggcgcaggcgcaccagccgaggttgt
agggccaagcctgtagtcagtgatgatgatagtgaagaggaccaagaagaggaccgctca
ggaagtggcacagaagacgactga
DBGET
integrated database retrieval system
