Hyla sarda (Sardinian treefrog): 130368713
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Entry
130368713 CDS
T11475
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq04350
TGF-beta signaling pathway
hsq04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130368713 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130368713 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsq04515
]
130368713 (NEO1)
Cell adhesion molecules [BR:
hsq04515
]
Immunoglobulin superfamily
DCC/UNC5 family
130368713 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Fn3_VIN3
FN3_DSCAM-DSCAML_C
V-set
Ig_Rha78A_N
Interfer-bind
fn3_SORL1
C2-set_2
fn3_2
Tissue_fac
C2-set_3
Unc5_NetrinR_N
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
130368713
NCBI-ProteinID:
XP_056428748
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All DBs
Position
4:complement(173858293..174002673)
Genome browser
AA seq
1449 aa
AA seq
DB search
MAARSPPGLGVRITRGLLAVSIYLILGQEPAGAARTAGSAFRTFTPFYFLTEPTDTVTLR
GTPTVLNCSVYAEPAAKIEWKKDGTFLNLVSDDRRRLLPDGSLFITSVVHSKHNKPDEGF
YQCVATVDSLGSIVSRTARLSVAGLPRFASQPEASSVYVGDSFVLSCDVSPELVPFVHWE
QNRSLRELDDRISILSNGSLVISFANESDVGLYRCSVGSGAAVKYSEEAEVKILAETGED
RPLIFLRQPSSLTSVVGQIAVFSCAVSGYPTPSVFWSHNQEELILGSSDRLALLAGGSLQ
ISNVTEEDAGIYTCTADNGNQTVHAQAELFVQVPPVFSVKPANTHAHESMDIVFECEVRG
KPAPTVKWVKNGDVVIPSDYFKIVDDHNLQVLGLVRSDEGFYQCIAENEVGNMQAAAQLI
IVEPGVTAPTSRAPSLTRATAHHVAATPGGPLPSSPRDVVASLVSTRFIKLTWRVPADAH
GENLTYQVYYNKEGMNRERVENTSRPGELQVTIQNLLPETVYYFRVVAHNNYGAGESSPP
LKVETQPEVQVPGPAPNIRAAAISPTSVSVSWETPLSGNGEIQNYKLYYMEKGAGNEQDF
DVSGLSYTVNGLKKYTEYTFRVVAFNKHGSGVSTQDVIARTLSDVPSAAPQNLTLEVRSS
QSILVQWQPPPAGTQNGQIVGYKLRYRKTARKVETNEILIDTQLSQLVNGLDRDTEYSFR
VVAMTVNGSGPATDWVSAETFENDLDESRVPDVPSSLHVRPLVTSIVVSWTPPENQHQVV
VRGYAIGYGLGSPHAQTVRVDHKQRYYTIENLDPSSHYVISLKAFNNVGEGIPLYESAVT
RQHTDTSEVDVYVVHASYTPVPEPTPMLPPVGVQAAILSSDTVRLTWADNSLPKNQKITD
ARYYTVRWKTNIPANTKFKMANSTVLSYLVSGLKSNTLYEFSVMVTKGRRSSTWSMTAHG
TTFESVPSSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVQAELHDWVI
EPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVPFRTPKESTPYMPNNQASGV
TGRGSRPPDTGGNNGPPPGGSNSPHGSPTSLDQNMLLTIIVSLGVITVLVAVVIAAICSR
RSSSHHKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPVDKSPETNPMLTDST
LPRSPQDITPGDSTTEGSIHQHSNSYRGLESEDSVSSLAGRRGIRPKIMMPFDSQPPQPV
VSAHPIHSIDNSHFRSVPGFMLHVLGGAPQATESVRHTPSCDTVVAASSSSQTGPEDPDP
PGGSFLPGSMDEDSGPSIPTAHIRPSHPLKSFAVPAVPAPAPGSAYEPLPSSPLLSQQVP
SALSVKTASLGTLGRVRPPLPVTVPSAPEPLETSRMLEGSECSYEPDELSKEMAHLEGLM
KDLNAITTA
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcggagccccccgggattgggtgtccggatcacccgggggctgctggcggtc
tccatctatctcattctcgggcaggagccggctggagctgcaaggactgcaggctcagcc
ttcaggacatttacccctttctacttcctgacagaaccgacagacactgtaacactacgt
ggaactcccactgttttaaactgctctgtgtatgctgagccagcagcaaaaattgaatgg
aaaaaagatggaacttttcttaatttagtatcagatgatcgtcggagactacttccagat
ggatctttgttcatcaccagtgtggtgcactcaaagcacaacaagcccgatgagggtttt
tatcaatgtgtggcaacggtggatagtttaggtagtattgtcagccgtacagcgcggctt
tctgtcgcagggcttcccagatttgccagccagccagaagcctcttcggtatatgttggg
gatagttttgtattaagctgtgatgtcagtccagaacttgtaccatttgttcattgggag
caaaaccgttcgctgagagagttagacgacagaatctctatactgtctaatggcagcctt
gttataagctttgccaatgaaagtgatgtcggtctgtatcgctgcagtgtgggcagtgga
gcagctgtaaagtacagtgaagaagcagaggtcaaaatactagcagagactggagaggat
cgccctttaatatttctacgtcagccttccagtttgaccagcgttgttggacaaatagca
gtcttttcctgtgctgtatctggttaccccacacccagtgtgttctggagtcataatcaa
gaagaactcattttggggagttcagacagattggcattgttggcaggaggcagcctgcag
atcagcaatgttacagaggaagacgctgggatctatacatgtactgcagacaatgggaac
caaacggtccatgcccaggctgagctctttgtacaagtgcctccagtgttttccgttaag
ccagctaacacacatgctcatgaatctatggatattgtgtttgagtgtgaagttagagga
aaacccgctccaactgtgaaatgggtgaagaacggagatgtggtcatcccgagtgactac
tttaaaatagtggatgatcataaccttcaggttcttggtcttgtgcgttcagatgaagga
ttttatcagtgtatagcagagaatgaggtgggaaatatgcaggcagcagcacagctcata
atagtagagcctggtgttaccgccccaacctctcgtgccccctcactgacccgtgccact
gctcaccatgtagctgccacaccaggaggtcccctcccctcatccccacgcgatgttgtt
gcctctttggtgtcaacgcgcttcatcaagctgacctggcgtgtccctgctgatgctcat
ggagaaaatcttacctaccaagtatattacaacaaagagggaatgaacagggagcgtgta
gagaacaccagccgaccaggtgaattacaggttaccatccagaacttgttgccagaaaca
gtatattacttccgtgttgtggctcataataattatggtgctggtgaaagttcaccccct
ctcaaggtggagacacaacctgaggttcaagttcctggtccagccccaaatatccgagct
gcagccatctcccctacctctgttagtgttagctgggaaacaccactttctggaaatggg
gaaattcagaattacaaactttattatatggagaaaggagcaggaaatgagcaggacttt
gatgtttcaggactttcatatactgtgaatggactaaagaaatacacagagtatacgttt
cgggtagtagccttcaataaacatgggtctggagtgtcaacacaagatgttatagcgagg
actctgtctgatgtgcccagtgcggctcctcagaaccttaccctggaggtgcgcagctca
cagagcattttagtgcagtggcaacctcctccagcaggaacccagaatggtcagattgta
gggtataaattgcgttaccgcaagactgcaaggaaggttgaaacaaatgagatcctgata
gacacccagctgtcacaacttgtcaatgggcttgatcgtgataccgaatatagctttcgg
gttgtggcaatgactgtgaatgggagtggaccagctactgactgggtttctgcagagact
tttgaaaatgatttggatgagtctcgtgttccagatgtgccaagttctctccatgtacgt
ccattagtaacaagtattgttgtaagttggacacccccagaaaatcagcaccaggtggtt
gtccgtggctatgctataggttatggtctggggagccctcatgcacagacagttcgtgtt
gaccataaacagcgatactacaccattgaaaacttggatcccagctcacattatgtcatc
tccttaaaagcctttaacaatgtgggagaaggaatacctttatatgaaagtgctgtcacc
cgccagcatacagacacttctgaggttgatgtttatgttgttcatgcctcatacacccca
gttccagagcccactcctatgttgccccctgtgggggtccaagctgctatcctcagcagt
gacacagtgcgccttacctgggctgacaactccctgcctaagaaccagaagatcaccgat
gccagatactacacagtaaggtggaaaaccaacattcctgcaaatacaaagtttaagatg
gccaacagcactgtgctaagttacttggtctctggattaaaatcaaatacactgtatgaa
ttctctgttatggttactaaaggtcgacgctcaagtacatggagcatgactgctcatggt
actacctttgagtcagtgccttcatcgcctcctaaggatgtgactgtggttagcaaagaa
gggaaaccacgtaccataattgtaaattggcagcccccatctgaagccaatggcaaaatt
actggttacattatatattatagcacagacgttcaagcagagcttcatgactgggttata
gaaccagttgttggaaaccgtttgacacaccaaatacaagagctgacactagacactcct
tactactttaagatccaggctcgaaactcaaaaggaatgggtcccatgtccgaggctgtt
ccatttcgcactccaaaagaatcaacaccttacatgcctaacaatcaagcatcaggtgta
acaggaagaggaagccgccccccagacacaggaggaaataatggacctccacctggaggc
agtaatagtcctcatggtagtcctacttctttggatcagaacatgctgcttacaatcatt
gtatctcttggagttataacagttttggtggctgtggtcattgccgccatctgctctcgt
cgctccagttcccatcataaaaagaaaagagctgcatgtaagtcagtaaatggatcccat
aaatacaagggtaactccaaggatgtaaagcctcctgacctctggattcatcatgagaga
ctggagttgaaaccagtggataaatccccagaaacgaacccaatgctaacagacagcacc
ctgcctcgatcaccacaggatatcactcctggagacagcaccacagaaggcagcattcac
cagcacagcaattcataccgaggcctggaatctgaagattctgtatcttcacttgctgga
cgtcgagggataagaccaaaaataatgatgccttttgactcccaacctccacaaccggtt
gtcagtgctcatcccatccattccatcgataattctcatttccgttctgtacctgggttc
atgctgcacgtgctgggtggtgctcctcaggctacagagtcagtgcgtcatactcctagc
tgtgatacagtagtagctgcatcatcatcttcacagactggtcctgaagacccagatccc
ccagggggaagttttctgcctggttctatggatgaggattctgggccaagtattcctact
gcgcatatcaggccatctcatcccttgaagagctttgcagtgccagctgttcctgctcca
gcccctggctcagcctatgaacctttgcctagctcaccacttctgtcacaacaagttccc
tctgcgctctcagtgaaaactgcttctcttgggactctgggaagagtacgtcctccactt
cctgttactgtgcccagtgcccctgaaccactagagaccagcagaatgcttgagggttca
gaatgtagctatgaaccagatgaattaagcaaggagatggctcaccttgaaggcctgatg
aaggatctgaatgccataaccacagcatga
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integrated database retrieval system
