Hyla sarda (Sardinian treefrog): 130369156
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Entry
130369156 CDS
T11475
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130369156 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsq03000
]
130369156 (ARID2)
03021 Transcription machinery [BR:
hsq03021
]
130369156 (ARID2)
03036 Chromosome and associated proteins [BR:
hsq03036
]
130369156 (ARID2)
Transcription factors [BR:
hsq03000
]
Eukaryotic type
Helix-turn-helix
ARID
130369156 (ARID2)
Transcription machinery [BR:
hsq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130369156 (ARID2)
Chromosome and associated proteins [BR:
hsq03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
130369156 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
130369156
NCBI-ProteinID:
XP_056429956
LinkDB
All DBs
Position
4:256943031..257064673
Genome browser
AA seq
1820 aa
AA seq
DB search
MSNSTVKSEPVQRRKGLAFLDELRQFHESRGSRFRKIPAVGGRELDLHSLYTRVTTLGGF
AKVSEKNQWGEIVEEFSFPRGCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVQPGNPKP
QLPIGAIPCTYNYQQHVVPDYLRQSYGLTMDFNTPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGTFSAVFGDEWKEKTDRDFVQFWKDI
VDDNEVRDLIYDKCRSQEGTSPESLWDSLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
SNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELQLDPVDFKTTHLMFHTIT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYKEIICHLSLPDVLLVISTLE
VLYMLTELGEVACVKIANVERSIDTLVCLISMDIQMFGPDALTAVKLIEHQSSNHQVVSE
IRPQTVEHVSTSANSSPASASRPVNAHAVPPPGIVEIDSEKFGCQWLNAHFEVNLETSVS
RSEMYSEYLSTCSKLARGGILTSSGFYKCLRSVFPNHNIKRVEDPNNNGQAHIHVSGVKR
RTLPLPIQMYYQQQPASNVVSDTNASGVPQGAGNPFQRTVAANPATNLTATQMSFPIQGV
HSVAQTVCRMPQNPHGQAQQQQNTTVTVIQNKAPISCEVVRAAVIQGSVQHSAVPVSIAL
GGSTQASLVHNHHNPGQQASVTVVGSQALFHHPSVIQQQSPLHTVVPGQLTSGTPVAVIQ
QTVPQGHIFGRVQSMPAGTSGLPQGQQLLTTSSQTVHVPSQQSPASNQQKDTVIITPQQY
VTTSSSNIMSACTTVQSFQVAAGQVVTIAGVQNPQTSRIGFQNIAPKPLSSQQVSSTTVV
QQPLQQQPQQSVVIVSQPAQPGQAYAPAIHQIVLTNPAAIQAGQTVQLTGQTNITPSSSP
VPTPNNQLPPVMTSPSTTSVSQGPPPTVSQMLSVKRQQLSPAPHQQQQVQAQQQPQAQLQ
AQPSQQVQQQQTQSGGVGLSSPAESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARA
PSPQVVYQVANNQTPSFGVQGQTASPQILVGQQNVQLVQSAMQNQAGVQTVPISNLQILP
GQLISNSPATIFQGATGNQVTITVVPNTSFATATVSQGSTPQIIAPMSGTQPGVGLQVQT
LPAALTQPGGQLPGSASSPPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCPKGSV
NTSNGETNENEVLMGNLLNGKKCDSSLPPSNSGKTPNEASQVVTNGSSLELGENGASLKQ
NSEQRDIQDGKTDFKKPQLNGVCDFEKVDCSHLSKNIPNHKASNHVGNGEISPMEQQDLL
DCSQVTAKGDQGEKLSNGPILPNSLSHFASSTNDVSNLAIQIQCGNSADLPNGPVVSSLN
SDVPQQRQTVVVSTQSTASVLSGHQVIAVPHIGTRITPPALPADTRSTNGTAECKAVKRP
VEDNDRESVPVIPNKVGVRIVTISDPNNAGCSATMVAVPAGVDPSTVAKVAIESAGQQKQ
QHPHTFVQTVVAQTTPITALPALQVQGHLVGSQSSPYPSTTTATTGHPTEQVKKPGQNFM
CLWQSCKRWFETPSQVFYHAATEHGAKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSR
EALLAGLKQEEQIQGGNQKSSNKQPSSGTPNPRAQKAIVNHPSAALMALRRGSRNLVFKD
FTDEKEGPITKHIRLTAALILKNVAKHSECGRRSLKRHENHLSVLALSNMEASSTLAKCL
YELNNTTHSTEQETDCEMMQ
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgtctaactcgacggtaaaatcggagccagtccagcggaggaaggggctggctttcctg
gatgagctgcggcagttccatgagagcagagggtcccgcttccggaagatccctgcagtg
gggggcagggagctggacctgcactccctctacaccagggtcactactttgggaggcttt
gcaaaggtctccgagaagaaccagtggggagaaatagtagaagaatttagctttccacgg
ggttgttccaatgctgcctttgctttgaaacagtattacttgcgatacttggaaaaatat
gagaaagtacatcactttggtgaagatgatgatgaagtccagcctggtaatcccaaacct
cagcttcctattggtgcaataccatgcacgtacaactaccagcagcacgttgtaccagat
tatttgcgtcaaagttatgggcttacaatggacttcaatacaccaaatgattacaacaaa
ctggtgctttcgctattatcggggctcccaaatgaagtggactttgcaataaatgtttgc
accctactgtccaatgaaagcaagcatgttatgcagcttgaaaaggacccaaaaattatc
acgttgttgcttgcaaatgctggtgtgtttgatgatactctgggaacattttctgctgtg
tttggtgatgaatggaaggaaaaaactgatcgtgattttgttcagttctggaaggatata
gttgatgacaatgaagtacgtgacctcatatatgacaaatgcagatctcaagaaggaaca
tctccagaatccttatgggactcattatttcatcctcctagaaagctaggtattaatgat
attgaaggacaacgtgttctccagatagcagtaattttgcgcaatctttcctttgaagag
agcaatgttaaacttctggcagctaatcggacttgtctccgcttcttgttactgtccgct
catagtcactttatttctcttcgacaactgggacttgatacactggggaatatagctgca
gagcttcagttggatcctgttgacttcaaaaccactcacctaatgttccatacaataaca
aaatgcctaatgtcacgggatagattcttaaaaatgagaggcatggaaatcttaggtaat
ttatgtaaggctgaagataatggagttcttatttgtgagtatgtggatcaggacagctac
aaggaaataatatgccatctttctctaccggatgtactacttgtgatctctactcttgag
gtgctctatatgcttacagaactgggagaagtagcttgtgtcaagatagcaaatgtagaa
cgaagtatagataccttggtgtgtcttatttcaatggatattcaaatgtttggacctgat
gcattaacggcagtgaaacttattgaacatcaaagctccaatcatcaagtggtttctgaa
attcgtccacaaacagtggaacatgttagcacttctgctaattcaagccctgcttcagct
tccagaccagttaatgcgcatgcagtgccacctcctggaattgtggaaatagacagtgaa
aagtttggatgtcagtggttaaatgcgcattttgaagtgaacttggaaacgtcagtgtca
aggtcagagatgtattctgaatacctctcaacttgtagtaaattggctagaggtggaatt
ctaacttcatctggattctacaaatgtctacgatcggtattcccaaaccacaatatcaag
agagtagaagatccaaacaacaatggacaagctcatattcatgtgtctggtgttaaacga
aggactttaccactcccgatccagatgtactatcagcagcaaccagcttctaatgtggta
tcggacacaaatgcttcaggagtaccacaaggagcaggaaatcccttccagagaaccgta
gcagctaacccagctactaatctaactgcaacacaaatgtcgtttcctattcaaggtgtc
cacagtgtggctcaaacagtttgtcgcatgccacagaatccccacggccaggcccaacaa
caacagaataccacagtgactgtaattcagaataaagctccaatttcgtgtgaagtggtt
agagctgcagtaatacaaggttctgttcaacattcagcagttcctgtcagtatagctttg
ggaggatcaacacaagcttcactagttcataatcaccacaatccagggcaacaggcttct
gttacagttgtgggttctcaggccttgtttcaccatccctctgtcattcagcagcaatcg
cctttacacactgtggtacctggtcagttaacatcaggaactccagtggcagtcatacaa
caaactgtacctcaaggtcatatatttggcagggtgcaaagtatgccagcaggtacatct
ggacttccacaaggtcagcaattactcaccacatcatcacaaactgttcatgtcccatcc
caacaatccccagcttccaaccagcagaaggatacagttatcataacgccacaacaatat
gtgaccacttcatcttctaacattatgtcagcttgtacaactgtacaaagtttccaagtc
gcagcagggcaagtggttacaatagctggtgttcaaaatcctcagacctctagaattgga
tttcaaaacattgccccaaaacctctttcttctcaacaagtatcctcaacaacagtagtc
caacaaccattgcagcagcaaccccagcaaagtgtagtaattgtaagccaaccagctcag
cctggtcaagcatacgcaccagccattcaccaaatagttcttactaatccagctgctatt
caggctggacaaactgttcagttaactggacagacaaatataactccttcctcttctcca
gtaccaactccaaataaccagctcccgcctgtaatgacttctccctctaccacttctgtt
tcacaagggccccctcctactgttagccaaatgctttctgtaaaaaggcagcagttgtca
ccagcacctcaccaacagcagcaagtacaagctcagcaacaaccacaggcacaactgcaa
gctcagccatcccaacaggttcagcagcagcagacccaaagtggaggtgttggactttct
agtcctgcggagtccagcctaatcaaacagttgttacttcccaaacgaggaccttcaact
cccgggggaaagcttattctccctgctccacagataccacctcccaacaatgcacgagca
ccaagccctcaggtggtgtatcaagtagccaataatcagacaccttcttttggtgtgcaa
ggacagactgcatctccacaaatacttgttgggcaacaaaatgtgcagttagttcaaagt
gcaatgcagaatcaagcaggtgtacagactgttccaatttcaaatttgcagattttgcca
ggccaattgatatcaaactctccagcaacaatatttcaaggagccactggcaaccaagtc
acaataacagttgtgccaaacacgagttttgctactgcaactgtaagccagggaagtaca
cctcaaattattgcaccaatgagtgggacacaacctggagttgggttacaggtacaaaca
cttccagctgctcttacacaaccgggagggcagttgccaggatctgcttcttctccccct
tttaagggtgataaaattatttgccaaaaggaggaagaagcaaaggaagctacaggcttg
cacgtgcatgaacgtaaaattgaagtaatggaaaacccttcttgtccaaaaggctctgtt
aacaccagcaatggggagactaatgaaaatgaagtgctaatgggaaaccttttgaatggt
aaaaagtgtgactccagtctacctccttcaaactcaggaaaaactccgaatgaggccagt
caagtggtcactaatgggtcatctttggaactgggggaaaatggagcttctttaaaacaa
aactcagaacagcgggatatacaggatggtaaaacggactttaaaaagccacagcttaat
ggggtttgtgattttgaaaaggtggactgttctcatttgagcaaaaacattcctaatcac
aaagcttccaatcatgtaggaaatggtgaaatatccccaatggagcaacaggaccttcta
gattgttctcaagttactgccaaaggtgatcaaggggaaaaactttcaaatggacctata
ttgcccaacagtttgtcacattttgcaagtagtacaaatgatgtttcaaaccttgcaatc
cagatacagtgtgggaattcagcagatttacccaatggacctgtagtttccagtttgaat
tcagatgtgcctcagcaacgtcagactgttgtagtttcaacccagtctacggcttctgtt
ttatcgggtcatcaagttattgcagtgccccatataggaactaggataactccacctgca
ttgcctgcagatacacgctctacgaatggcacagcagaatgcaaagctgttaaacgacca
gtagaggacaatgacagggaatctgtcccagttattcccaataaagtgggagtaaggatt
gttacaatcagtgaccctaataatgctggctgtagtgcaaccatggtcgctgtgccagca
ggtgttgatccaagcactgtagctaaagtagcaatagaaagtgctggtcagcaaaagcag
cagcacccacatacttttgtacagacagttgttgcacagactacaccaataacagcacta
ccagcattacaagttcaaggccacctagttggttcccagtcctctccatatccttctaca
acaacggctacaacaggtcaccctacagaacaagtaaagaaaccggggcaaaatttcatg
tgcctgtggcagtcgtgcaaaaggtggtttgaaactccgtcccaagtgttctaccatgct
gcaacagagcatggtgctaaagatgtatatcctgggcagtgcctgtgggaaggctgcgaa
ccctttcagagacagaggttttcttttatcactcacttacaggacaaacactgctcaaga
gaggccctcctcgctggattaaaacaagaggagcagatccaaggcggaaatcaaaaatct
tccaataaacaaccctcttcagggacgcccaaccctcgcgctcaaaaagcaattgtgaac
catccaagtgctgccctcatggcactcaggcggggatcaaggaatcttgtttttaaagac
tttacagatgaaaaagagggaccaatcacaaaacacatccgtttaacagctgccttaata
ttaaaaaatgttgcaaaacactcagaatgtggtcgaagatcattaaagagacatgaaaat
cacttatcggttctagcccttagtaatatggaagcttcctctacacttgccaaatgcctt
tatgaacttaataatacaactcatagtacagaacaagaaacggactgtgaaatgatgcag
tag
DBGET
integrated database retrieval system
