Vreelandella sulfidaeris: HSBAA_03350
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Entry
HSBAA_03350 CDS
T06264
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hsr
Vreelandella sulfidaeris
Pathway
hsr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HSBAA_03350 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsr03021
]
HSBAA_03350 (rpoA)
03400 DNA repair and recombination proteins [BR:
hsr03400
]
HSBAA_03350 (rpoA)
Enzymes [BR:
hsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HSBAA_03350 (rpoA)
Transcription machinery [BR:
hsr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HSBAA_03350 (rpoA)
DNA repair and recombination proteins [BR:
hsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HSBAA_03350 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BBI59029
UniProt:
A0A455U2S7
LinkDB
All DBs
Position
213887..214654
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AA seq
255 aa
AA seq
DB search
MSLKSSLNLKDVAIKMHSRDEAVLTLNKQGPAVVTAGDIALDHSVEIVNPDHIIAHVNEG
AELKIQLKVALGRGYEPADARGSDEESRAIGRLQLDATFSPVRRVSYSVEAARVEQRTDL
DKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQEVEEEEDHVDPILLRPVD
DLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLNEIKDVLAARGLSLGMRL
ENWPPASLKDDKASA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgaaatcctccctgaacttgaaagatgttgcgatcaagatgcacagccgcgat
gaggcggtgctcacgctgaacaagcagggcccagccgtcgtcaccgctggcgacattgcg
cttgatcatagcgtcgaaattgtcaacccggaccacatcattgctcatgtcaatgaaggt
gccgagctgaaaattcagcttaaggtagcgctgggtcgtggctacgaaccggctgacgca
cgcggctctgatgaagagtcacgggctattggccgcctgcagctggatgccaccttcagc
cctgtccgccgtgtttcctattcggttgaagccgctcgtgttgagcagcgcaccgacctc
gataagctaattatcgatctggaaaccgacggtaccctggatccggaagaggctatccgt
cgcagtgcgaccatcctgcaagagcagctggccgccttcgtcgacctggaagctgataaa
gaacaggaagtcgaagaggaagaggatcatgtcgatcctattctattgcgccccgtagac
gatcttgagttgaccgttcgcagcgcgaactgcctaaaagccgagaatatttattacatc
ggtgatcttattcagcgcacagaagttgagctgttgaagacaccgaatctcggtaaaaag
tctttgaatgaaatcaaagatgtattggcggcgcgcggcttgtccctcggcatgcggttg
gaaaattggccaccggcaagcctgaaggacgacaaggcctccgcgtga
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