Vreelandella sulfidaeris: HSBAA_05530
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Entry
HSBAA_05530 CDS
T06264
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hsr
Vreelandella sulfidaeris
Pathway
hsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HSBAA_05530 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsr03019
]
HSBAA_05530 (pnp)
03016 Transfer RNA biogenesis [BR:
hsr03016
]
HSBAA_05530 (pnp)
Enzymes [BR:
hsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HSBAA_05530 (pnp)
Messenger RNA biogenesis [BR:
hsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HSBAA_05530 (pnp)
Transfer RNA biogenesis [BR:
hsr03016
]
Prokaryotic type
tRNA degradation factors
HSBAA_05530 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
KH_Mug60-KHD4
Motif
Other DBs
NCBI-ProteinID:
BBI59247
UniProt:
A0A455U0Z7
LinkDB
All DBs
Position
342120..343952
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AA seq
610 aa
AA seq
DB search
MNEVQVVCTVLSTDRNHDPDIAALLGTSAALSISGVPFSGPIGAARVGFNEEQGYFLNPT
VEELATSELDMVVAGTEKAVLMVESEAKELLEDEMLGAVLFGHQEMQVAISAIKELTAEA
GKPRWEWQATEENQALKAAIADAFEAKVGDAYRITDKMQRQDALAELKDQAIQQLVADEG
EPVNDKFSKDDVKGAFAGLEKRVVRSRVVKGEPRIDGRDNQTVRPLAIEVGVLPKAHGSA
VFTRGETQAIAVATLGTLRDSQLIESLEGERKDRFMLHYNFPPYSVGEAGFMGGPKRREI
GHGRLARRGVQAMLPSEDVFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPV
AGIAMGLVKDPDGFAVLTDILGDEDHLGDMDFKVAGSEEGVTALQMDIKIEGINEEIMEL
ALQQALTARLSILEQMNVVISQSRSDVSDNAPSMATIKIDPDKIRDVIGKGGATIRKICE
DTGASIDLDDDGTVRIYAEDKAAAKRAIDTVLAITAEAEIGKLYHGKVVRIADFGAFVNI
MPGTDGLVHISQIVAERVNNVRDFLNEGDDVIVKVLDIDNRNRVKLSMKEITEEEKAAFA
AETTETESTI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtgcaggttgtctgtaccgttctttctaccgatcgtaatcacgatccggat
attgccgcactgcttggcacctcagcggcgctgagcatctctggcgtgccgtttagtggc
ccgattggtgcagcccgcgttggttttaacgaagagcagggttacttcctcaatcccacc
gtggaagagctcgctacttctgagctggacatggtcgtcgccggtactgaaaaagcggtg
ctgatggttgagtccgaagccaaagagctgcttgaagacgaaatgctgggtgccgtactg
ttcggtcaccaggagatgcaggttgcgattagcgcgattaaagagctaaccgctgaagcg
ggcaaaccgcgctgggagtggcaagctaccgaagagaaccaagcgctgaaagctgccatt
gccgatgcttttgaggccaaggtgggcgatgcctaccgcattaccgacaaaatgcagcgt
caggatgcattggcggagctgaaagaccaggcgattcaacaactggtggccgatgaaggc
gaaccggttaacgacaagttcagcaaagatgacgtcaaaggcgccttcgcgggcttggaa
aagcgcgttgtgcgttcacgcgtcgtcaaaggcgagccgcgtatcgatggtcgtgacaac
caaaccgtgcgtcccttggccatcgaagtaggtgtgctacccaaagcacacggttctgcc
gttttcacccgcggtgagacccaggcgattgccgtggcgacgctgggtacgctgcgtgat
tcccagcttatcgaatcattggaaggtgagcgtaaagaccgcttcatgctgcactacaac
ttccctccctactcagtgggcgaagctggctttatgggtggcccgaagcgtcgtgaaatc
ggtcatggtcgcttagcgcgtcgtggcgtgcaggcaatgctgccgtcagaagacgttttc
ccctacaccattcgtgtggtgtctgaaattaccgagtctaacggctcaagctcgatggcc
tcagtgtgcggttcttcgcttgctttgatggacgcgggcgttccgctcaaagcgccggtc
gccggtatcgccatgggcttggtaaaagatccagacggctttgcggtattgaccgatatc
ctgggtgatgaagatcatcttggcgatatggactttaaagtcgccggttctgaagagggc
gtgaccgccctgcagatggacatcaagatcgaaggcatcaatgaagagattatggagctc
gcgctgcagcaagcactgaccgcgcgtctgagtatcctcgagcagatgaatgtcgtgatc
agccagagccgtagcgatgtctctgacaacgcgccgtccatggcaacgattaaaatcgat
ccagataaaatccgtgacgtaattggcaagggcggcgctacgatccgtaaaatttgcgaa
gacaccggtgcgtctatcgatctggatgatgacggtaccgttcgcatctacgctgaagac
aaagccgctgcgaagcgagcgattgacaccgtattggcgattaccgctgaagcggaaatc
ggcaagctgtatcacggcaaggtcgtgcgtattgccgatttcggcgcgtttgttaacatt
atgccgggtactgatggtctggtgcacatctctcagatcgttgccgagcgagtgaataac
gtacgtgacttcttgaacgaaggcgatgacgtgattgttaaagtgctcgatatcgacaat
cgtaaccgcgtgaagctgtcgatgaaagagatcactgaagaagagaaagccgcttttgca
gcggaaacaacggaaaccgaatctacgatttaa
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