Vreelandella sulfidaeris: HSBAA_05620
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Entry
HSBAA_05620 CDS
T06264
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hsr
Vreelandella sulfidaeris
Pathway
hsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HSBAA_05620 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsr03019
]
HSBAA_05620 (pcnB)
Enzymes [BR:
hsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HSBAA_05620 (pcnB)
Messenger RNA biogenesis [BR:
hsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HSBAA_05620 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
PolyA_pol_arg_C
Gad2
Motif
Other DBs
NCBI-ProteinID:
BBI59256
UniProt:
A0A455U080
LinkDB
All DBs
Position
complement(349584..350786)
Genome browser
AA seq
400 aa
AA seq
DB search
MLYRLSGAGYDAYLVGGCIRDALLGKMPKDFDVATNATPEQVRDLFRNSRLIGRRFRIVH
VRFGREVIEVTTFRGKPQDEHGDHIAHQSDEGLLLRDNVWGNIEEDALRRDFTVNALYHN
IADFSITDFANGAKDIETRTLRLIGDPATRYREDPVRMLRAVRFAAKLDFTLDPATEAPM
YDQAPLLLQIPPARLFDEVLKLFMSGHGLVTFRMLSHYGLFGMLFPEAEEAMADAAWAEE
LIEQALTNTDKRIAEERPVTPAFLLAAFLWAPVKQRQEELEQEGMPAIPALQAAAQQVVS
RQLEFTSIPKRFGIPMREIWELQQRLPQRRGKKPFKLVSIHAFERDMTYSCYVNKRARYR
AVWATGGPPFSAVMSTSSVACCKSWRRPGKSRRWSSQTAA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
gtgctttatcgccttagtggcgcaggttacgacgcttacttggtgggcggctgcattcgc
gatgcactgcttggcaaaatgcccaaggacttcgacgttgccaccaacgccactcccgag
caggtacgcgatctgtttcgtaattcgcgactgatcggccgccgttttcggattgtccat
gtgcgctttggccgcgaggtcatcgaggtcaccaccttccgtggcaaaccccaagacgag
catggcgatcacattgcccaccagtccgatgaagggttactgctgcgcgacaatgtatgg
ggtaatatcgaagaggatgcgttgcgtcgcgacttcactgttaatgcgctctaccacaat
attgccgacttcagcatcaccgattttgccaatggtgcgaaggacattgaaacgcgcacc
ctgcgtttaattggcgacccggcgacgcgttatcgcgaagaccccgtgcggatgctccgg
gcggtgcgctttgcagccaaactggacttcacactagaccctgccaccgaagcgccgatg
tacgatcaggcgccgctgctgctgcagataccgccagcgcggctattcgatgaagtgctc
aagctgtttatgtcgggccatggtttagtgacctttcgtatgctgagccactacggtcta
ttcggcatgctgttccctgaagcagaagaagccatggccgatgccgcctgggcagaagag
ctaattgagcaagcgcttaccaataccgacaaacgcattgccgaagagcgcccggtcact
ccggccttcctgctggcagcatttttgtgggcgccggttaaacaacgccaggaagagctg
gagcaagagggcatgccggctattcctgccttgcaagccgccgctcagcaagtggtctct
cgtcagttagaattcacatcaattcccaagcgctttggtattcccatgcgggaaatttgg
gaactgcagcagcggctgcctcaacggcgtggtaaaaagcctttcaaactcgtgagcatc
cacgctttcgagcgggatatgacttactcctgctacgtgaacaagcgggcgagataccgc
gcggtttgggcgactggtggaccgcctttcagcgcggtgatgagcacgagcagcgtcgct
tgctgcaaaagttggcggcgacccggcaagtcaaggcgatggtcgtcgcaaacggcggcg
taa
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