Vreelandella sulfidaeris: HSBAA_06990
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Entry
HSBAA_06990 CDS
T06264
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hsr
Vreelandella sulfidaeris
Pathway
hsr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HSBAA_06990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsr03400
]
HSBAA_06990
Enzymes [BR:
hsr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HSBAA_06990
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HSBAA_06990
DNA repair and recombination proteins [BR:
hsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HSBAA_06990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-ProteinID:
BBI59393
UniProt:
A0A455U2J6
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All DBs
Position
441072..442025
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AA seq
317 aa
AA seq
DB search
MPEMPEVETTRRGIAPYIEGQEITEVLVRQPRLRVPVPDDLAERLVGARIGVLKRRAKYL
QIPIHSTPPSGSADSTLLWHLGMSGSLRIANVGDLPKKHDHVDVVTASGYVLRYHDPRRF
GFVDWQADDETQDRRLAHLGPEPLSDAFNGKWLYTLSRNKRVAVKPFLMDNQVVVGAGNI
YAAEALFMAGIDPRRAAGRISRARYDALSPCRERSVGSGDYARWHYAERLCQWSGRARLL
CPAPECLRPPRPALFTLWRGTTPHYARPARQRVLPRLPALMAAAKNGACAINIDCFLCVI
ALPTFFGDCCDPTPAPE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaatgcccgaagttgaaacgacccgacgcgggattgccccttatattgaaggc
caagaaatcaccgaagtgctggtgcgccagccgcggctgcgtgtgcccgtgccggatgac
ttggctgagcgattggtgggcgcgcgcattggtgtcttgaagcggcgcgctaaatacctg
caaatacccattcactccacgccgccatctggcagtgctgattctacgctgctgtggcac
ttgggcatgtcgggcagtttacgcattgctaacgtgggtgacttgcctaaaaagcatgat
cacgtcgatgtggtcactgctagcggttatgtattgcgctatcacgacccgcgtcggttt
ggttttgtggactggcaggccgatgacgagacgcaggacaggcgtcttgcacatctgggt
cctgagcctttgtctgatgcgtttaacggcaaatggctttacaccctctcgcgtaacaag
cgagtggcggtaaagccctttctgatggataaccaggtggtggtgggggccggtaatatc
tacgcggcagaagcgctgtttatggcgggcatcgatccccgccgtgcagcgggacgaatt
tcccgcgctcgctacgacgctttatccccttgccgtgaaagaagtgttggcagcggcgat
tacgcaaggtggcactacgctgagagactttgtcagtggtcagggcgagcccggttactt
tgcccagcgcctgaatgtttacggccgccacggccagccctgtttacgctgtggcgcgga
actacgccgcattacgctaggccagcgcgccagcgtgttttgccccggctgccagcgttg
atggcagccgctaaaaacggcgcttgcgctattaatattgattgtttcttatgtgtgatt
gctttgcctacgttttttggagattgttgtgacccaacgcctgcgcctgaataa
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