Vreelandella sulfidaeris: HSBAA_47340
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Entry
HSBAA_47340 CDS
T06264
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
hsr
Vreelandella sulfidaeris
Brite
KEGG Orthology (KO) [BR:
hsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsr03009
]
HSBAA_47340 (dbpA)
Enzymes [BR:
hsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HSBAA_47340 (dbpA)
Ribosome biogenesis [BR:
hsr03009
]
Prokaryotic type
rRNA helicases
HSBAA_47340 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
BBI63428
UniProt:
A0A455UGJ1
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All DBs
Position
complement(2974554..2975951)
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AA seq
465 aa
AA seq
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MSDSSFSSLALPNVLLSNLTSLGYHEMSPVQAESLPPMLAGRDVLAQAKTGSGKTAAFGL
ALLAKLKVESFAVQGLVLCPTRELADQVAEELRRLARGMANVKILTLCGGAPFGPQLGSL
EHGAHIVVGTPGRIDEHLRKGSLTLESLSTLVLDEADRMLDMGFQATIDDIIAETPTDRQ
TLLFSATFPDEHASGGLTAMTRGVMREPVMVKIAEVHDATTIQQHFYNVANEEARFDALR
QLLLFYRPATSVVFCNTKRETQAVAEQLTDAGFSAVALNGDLEQKDRDRILILFSNQSAS
ILVATDVAARGLDIAQLDAVFNYQIARELDVHVHRVGRTGRAGASGIACTLVTPKESYRL
ERLEGLLEQPIATEPLPKPKQSVPFEPPMATLQLAGGKKDKLRPGDILGALTSEGGLRGE
QVGKIKVLARSAYVAIERSVIQQAQAKLERDKLKGRAFRVRRIRY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgactcctctttctcctcgttagcgttgccgaacgttctgctgagcaaccttacg
tcccttggctatcatgaaatgtcgccagtgcaggcggaaagcttaccgcccatgctagcc
gggcgcgatgtgctggcgcaggcgaaaaccggctcaggcaaaacggcggcgtttggttta
gcgctgctggctaaattgaaagtagagagctttgcggtgcaaggcttggtgctgtgcccc
acccgtgagctcgctgaccaagtggcggaagaactgcgccgtttagcccgcggcatggcc
aatgtcaaaatactcaccctttgcggcggtgctccttttgggccgcagcttggttctcta
gagcatggcgcgcatattgtggtaggcacgccagggcgtattgacgagcatttacgcaaa
gggtcgctgacgctggaatcgctttcgaccctggtgttggatgaagccgaccgtatgctg
gatatgggcttccaagcgaccatcgatgacatcattgccgagacgccaactgaccgccaa
acgctgctgttcagcgcgactttccccgatgagcatgcatcaggcgggctaaccgcaatg
acgcggggcgtgatgcgtgagccggtgatggttaaaattgccgaggtgcacgacgctact
acgattcaacagcacttttataatgttgccaatgaagaggcgcgttttgatgcattacgc
cagctactgctgttctatcggcccgctaccagcgtggtgttctgtaacaccaagcgcgaa
acccaggcagtggctgagcagctaacggatgctgggtttagcgccgtggcactcaacggc
gatttagagcagaaagaccgcgaccgtattctgattctattttcgaaccagagtgcttct
attttggtggccactgacgttgccgcgcgcggcttggatatcgcccagttggatgcggtg
ttcaattaccaaattgcccgcgagcttgatgttcacgtacaccgggtggggcgcactggg
cgcgccggggccagtggtatcgcctgcacgctagtgacccccaaagagagttatcgtctt
gagcgactggaaggtttgcttgagcaacctattgccactgagcctttgcctaaacccaag
cagtcagtgccgtttgagccgccgatggcgacgctacagttagccggtggcaagaaagat
aaactgcgccccggcgatattcttggcgcgctgaccagcgaaggcgggttgcgcggtgag
caagtaggtaagattaaagtgctggcgcgcagtgcctatgtggccattgagcgcagcgtg
attcagcaggctcaggctaagcttgagcgtgataaattaaaaggacgagctttccgtgtt
cgccgtatccgttattga
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