Halorubrum sodomense: J7656_00235
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Entry
J7656_00235 CDS
T07186
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hss
Halorubrum sodomense
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hss03400
]
J7656_00235
DNA repair and recombination proteins [BR:
hss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J7656_00235
Archaeal homologous recombinant proteins
J7656_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
AAA_15
SMC_N
AAA_29
AAA_13
MAD
ABC_ATPase
TPR_MLP1_2
zf-C4H2
COG6_N
HWE_HK
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QUO47849
UniProt:
A0A8T8LL08
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All DBs
Position
45698..48391
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AA seq
897 aa
AA seq
DB search
MKFDRVRLANFKPYGDADLRLTEGVTVIHGLNGSGKSSLLEACFFALYGSKALDGTLEDV
ITNGEEETEVELWFTHDGVSYRVERRLKSYDGRIDHQCTLESIDGSDVTRDGARAVREFV
TELLRMDAEAFVNCAYVRQGEVNKLINATPRERQDTIDDLLQLGKLEEYRERAGDARLGV
EDVLENRRGRLDQLDEQIAAKEDRDLHGRLNELESELGEVDEDIDRYESQREQAKETRDA
AAETLETHAEKREELESVEGEIDEIEAAIREAERERDNHRDAIREARERIGEIESEIDDR
LDDAGLDAASEEAIADRREELGDREEAVREELDDERVSAEAFRNQATNLAGKADDRTERA
AEIESEADDLADEAEAAAEEADEREASIEELREEADGLRERIAAADADVDRDGVSEERDA
LRDERGEVRERIAELSAELKNARERVEEAEELLAAGKCPECGQPVEDSPHASGIEEDRER
VAELEAELEDAREREDDLDERIAELDELASAADRLDEIDERVETLESRVEEKREEAERKR
ESAEEKRERAADLREEAEETREVAAQKRDEAEEAAERVEELEASLSEIDDDREAVTAIEE
RLSAIAEAEDEIERRREKRENLEEVNDERRGRLADKRDRRDELADAVDEAAVENAKERKA
DAEQYLEQVAEELDRLGERREEIQNAIGGVKGELSELEALREEREALGERVEALETLHEE
TSELESMYGDLRAELRQRNVAELERTLNETFELVYGNDAYSHIELDGEYVLTVYQKDGEP
LDPEQLSGGERALFNLSLRCAIYRLLSEGIEGAAPTPPLILDEPTVFLDSGHVSRLVRLV
EEMRGFGVAQIVIVSHDDELVGAADELVTVEKDPRSNRSTVRREDAAELDLASLADD
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcgaccgcgtccgcctcgcgaacttcaagccgtacggggacgcagacctgcgg
ctgacggagggggtcacggtgatccacgggctcaacggcagcgggaaatcgtcgctgctg
gaggcctgcttcttcgcgctgtacgggtcgaaggcgctcgacgggaccctcgaggacgtc
atcacgaacggcgaggaggagacggaagtggagctgtggttcacccacgacggcgtctct
tatcgggtcgagcgccggctcaagtcctacgacggccggatcgaccaccagtgtacgctc
gaatcgatcgacgggagcgacgtgacccgcgacggcgcgcgggcggtccgcgagttcgtc
acggagctgctgcggatggatgccgaggcgttcgtcaactgcgcgtacgtgcggcagggc
gaggtgaacaagctcatcaacgccaccccgcgggagcgacaggacacgatcgacgacctg
ctccagctggggaagctcgaggagtaccgcgagcgcgccggcgacgctcggctcggcgtc
gaagacgtcctcgaaaaccgtcgcgggcggctcgaccagctcgacgagcagatcgccgcg
aaggaggaccgggacctccacggacgactcaacgagttagagagcgaactcggcgaggtc
gacgaggatatcgatcggtacgagagccagcgcgaacaggcgaaggagacgcgcgacgcg
gccgcggagacgctcgagacccacgccgagaagcgggaagagttggagtcggtcgaaggg
gagatcgacgagatcgaggccgcgatccgcgaggccgagcgcgagcgcgacaaccaccgc
gacgcgatccgcgaggcccgcgagcggatcggagagatcgaaagcgagatcgacgaccgg
ctcgacgacgccggcctcgacgcggcgagcgaggaagcgatcgccgaccgccgcgaggag
ctcggcgaccgggaagaggcggtccgcgaggagctcgacgacgagcgggtgagcgccgag
gcgttccggaaccaggcgacgaacctcgccgggaaggcggacgaccgcaccgagcgcgcc
gcggagatcgagtccgaggccgacgacctcgccgacgaggcggaggcggcggccgaggag
gccgacgaacgcgaggcctcgatcgaggaactgcgcgaagaggccgacggactccgcgag
cggatcgcggccgccgacgccgacgtcgaccgcgacggggtcagcgaggagcgggacgcg
ctgcgcgacgagcgcggcgaggtccgcgaacggatcgccgagctgtcggcggagctgaag
aacgcccgcgagcgggtcgaagaggccgaggagctgctcgcggcggggaagtgtcccgag
tgcgggcagccggtcgaggactcgccgcacgccagcgggatcgaggaggatcgtgagcgc
gtcgcggagctcgaagcggagctggaggacgcccgcgagcgcgaggacgacctcgacgag
cggatcgcggagctggacgagctcgcgagcgccgcggaccggctcgacgagatcgacgag
cgggtcgagaccctcgaatcgcgggtcgaagagaagcgcgaggaggcggaacggaagcgg
gagtcggccgaggagaagcgcgagcgcgcggccgacctcagggaggaggccgaagagacc
cgcgaggtcgccgcgcagaagcgcgacgaggcagaggaagccgcagagcgcgtcgaagag
ctggaggcgtcgctgtcggagatcgacgacgaccgcgaggcggtgacggcgatcgaagag
cgcctgtccgcgatcgcggaggcggaagacgagatcgaacgacgccgcgagaagcgggag
aacctcgaggaggtgaacgacgagcggcgcggccggctcgccgacaagcgcgatcgccgc
gacgagctcgcggacgccgtcgacgaggccgcggtcgagaacgcgaaggagcggaaggcc
gacgccgagcagtacctcgaacaggtcgccgaggagctcgaccgtctcggcgaacggcgg
gaggagattcagaacgcgatcggcggggtgaaaggcgagctcagcgagctggaggcgctc
cgcgaggagcgcgaggcgctcggcgagcgcgtcgaagcgctcgaaacgctccacgaggag
acgagcgagctggagtcgatgtacggcgacctgcgcgcggagctccgccagcgcaacgtg
gccgaactggagcgcacgctcaacgagacgttcgagctcgtctacggcaacgacgcctac
tcccacatcgagcttgacggcgagtacgtcctcaccgtctaccagaaggacggcgagccg
ctcgaccccgagcagctctccggcggggagcgcgccctgttcaacctctcgttgcgctgc
gcgatctaccggctgctctccgaggggatcgagggcgcggcgccgaccccgccgctcatc
ctcgacgagccgaccgtcttcctcgactccggccacgtctcgcggctcgtccggctggtc
gaggaaatgcgcgggttcggcgtggcccagatcgtcatcgtgagccacgacgacgagctg
gtgggcgcggccgacgagctggtcaccgtcgagaaggacccgcgctcgaaccgctcgacc
gtccgccgggaggatgcggcggagcttgacctcgcgtcgctcgcggacgactga
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