Halorubrum ruber: J7656_00285
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Entry
J7656_00285 CDS
T07186
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
hss
Halorubrum ruber
Pathway
hss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
J7656_00285 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hss03019
]
J7656_00285 (prf1)
03012 Translation factors [BR:
hss03012
]
J7656_00285 (prf1)
Messenger RNA biogenesis [BR:
hss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
J7656_00285 (prf1)
Translation factors [BR:
hss03012
]
Eukaryotic type
Release factors
J7656_00285 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
ZnF_RZ-type
RbpA
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QUO47858
UniProt:
A0A8T8LLQ8
LinkDB
All DBs
Position
complement(60237..61487)
Genome browser
AA seq
416 aa
AA seq
DB search
MSSDAQEANEDRRKYEFRKVIEELKDYEGSGTQLVTIYIPEDKQISDVVAHVTQEHSEAS
NIKSKQTRTAVQDALTSIKDRLRYYDTFPPDNGIVIFSGAIDSGGGQTDMVTRTLESPPQ
PVESFRYHCDSEFLTEPLEHMLEDSGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFVDKRHELDGILVGGPSPTKDEFLDG
DYLHHELQDKVLGKFDVAYTDESGLKDLVDAGQEALADQEIVQDKNDMEEFFEKLNTGQE
ATYGFEQTRRNLIMGSVDRLLISEDLRSDVVVYECPNGHEEYEVVDARHSTPDHECSECG
DEAAVEEREDVIEHLMAIAEQRGTETRFISTDFEKGEQLLDAFGGIAGILRYSTGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgacgcacaggaggcgaacgaggaccgccggaagtacgagttccgcaaggtc
atcgaggagctcaaagactacgagggctccggcacccagctcgtcaccatctacatcccc
gaggacaagcagatctccgacgtggtggcccacgtcacccaagagcacagcgaggcgtcc
aacatcaagtcgaagcagacccggaccgccgttcaggacgcgctcacgtcgatcaaggac
cgactgcgctactacgacacgttcccgcccgacaacgggatcgtgatcttctcgggcgcg
atcgacagcggcggcggccagacggacatggtcacgcggacgctggagtcgcccccgcag
cccgtcgagtcgttccggtaccactgcgactcggagttcctcaccgagccgctcgaacac
atgctcgaagactccgggctgttcgggctcatcgtcttggaccgccgcgaggcgaacgtc
ggctggctgaaggggaaacgcgtcgagcccgtcaagtccgcctcctcgctcgtccccggc
aaacagcggaagggtggccagtccgcccagcggttcgcccggctgcgcctcgaagcgatc
gacaacttctaccaggaggtcgcggggatggccaacgacctgttcgtcgacaagcgccac
gagctcgacggcatcctcgtcggcggcccctcgccgacgaaagacgagttcctcgacggc
gactacctccaccacgagctccaggacaaggtgctgggcaagttcgacgtcgcctacacc
gacgagtccgggctgaaggacctcgtcgacgcgggccaggaggcgcttgccgaccaggag
atcgtccaggacaaaaacgacatggaggagttcttcgagaagctcaacaccgggcaggaa
gccacctacgggttcgaacagacccgtcggaacctgatcatgggctccgtcgaccggctg
ctcatctccgaggacctccgctccgacgtcgtcgtctacgagtgccccaacggccacgag
gagtacgaggtggtcgacgcccggcactcgacgcccgaccacgagtgtagcgagtgcggc
gacgaggccgcggtcgaggagcgcgaggacgtcatcgaacacctgatggccatcgcggag
cagcgcggcaccgagacgcggttcatctccacggacttcgagaagggcgagcagctgctc
gacgcgttcggcggaatcgcgggaattctgcggtactcgaccggcgtctaa
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