Halorubrum ruber: J7656_00720
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Entry
J7656_00720 CDS
T07186
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hss
Halorubrum ruber
Pathway
hss03030
DNA replication
hss03420
Nucleotide excision repair
hss03430
Mismatch repair
hss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J7656_00720
03420 Nucleotide excision repair
J7656_00720
03430 Mismatch repair
J7656_00720
03440 Homologous recombination
J7656_00720
03460 Fanconi anemia pathway
J7656_00720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hss03000
]
J7656_00720
03032 DNA replication proteins [BR:
hss03032
]
J7656_00720
03400 DNA repair and recombination proteins [BR:
hss03400
]
J7656_00720
Transcription factors [BR:
hss03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
J7656_00720
DNA replication proteins [BR:
hss03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
J7656_00720
DNA repair and recombination proteins [BR:
hss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
J7656_00720
MMR (mismatch excision repair)
J7656_00720
DSBR (double strand breaks repair)
HR (homologous recombination)
J7656_00720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
OB_MEIOB_N
Ssb-like_OB
tRNA_anti_2
SSB
RADX
Motif
Other DBs
NCBI-ProteinID:
QUO47932
UniProt:
A0A8T8LL18
LinkDB
All DBs
Position
complement(153789..155291)
Genome browser
AA seq
500 aa
AA seq
DB search
MGAIEEVYEDLDTDVEFEEFEAAVEDKVEQMGGLADEETAAMLIAHELRDEEADTIADIE
PGMNDVKFLGKVTAIGEVKTFERDDEEAEEGRVCNIDVADASGSVRVALWDEMAAAAEEQ
LEVGQVLRVMGRPKEGYSGLEVSADKVEPDEDAEVDVQVLDTYRVEDLTLGASDVNLVGQ
VLDTDSIRTFDRDDGSEGRVANLTVGDETGRVRVTLWDGKADLAEEFEAGEVVEVGDGYV
RERDGDLELHVGDRGTVERVDEDVEYVPETTDIADLEIGETVDVGGGVIETDPVRTFDRD
DGSEGQVRNVRIKDETGEIRVALWGDKADREIDLADRVVFTDVEIQDGWQDDLEASANWR
STVTVLDEGSDAAAGVADGASAASAAGGNEAGGSDDRDADETGLGAFAEDGRKAAAEAVA
GESGEGEAGSASGGAAAATAEASGEDVEFTGTVVQTGDPVVLDDGQRTRTVDTDASLRLG
EEVTVRGPERDGTIDADDVF
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgggagccatagaggaggtgtacgaggacctcgacacggatgtcgagttcgaggagttc
gaggccgctgtcgaggacaaagtcgagcagatgggcgggctcgccgacgaggagaccgcc
gcgatgctcatcgcgcacgagctgcgcgacgaggaggccgacaccatcgccgacatcgag
ccggggatgaacgacgtgaagttcctcggcaaggtgaccgccatcggcgaggtcaaaacc
ttcgagcgcgacgacgaggaggccgaggagggccgcgtgtgtaacatcgacgtcgcggac
gcctcgggctctgtccgggtcgcgctgtgggacgagatggctgccgccgccgaggagcag
ttggaggtcggacaggtgctccgcgtcatgggccgcccgaaggaggggtacagcgggctc
gaagtgagcgcggacaaggtcgaacccgacgaggacgccgaggtcgacgtgcaggtactc
gacacctaccgcgtcgaggacctcacgctcggcgcctccgacgtcaacctcgtcggacag
gtgctcgacactgactcgatccggacgttcgaccgcgacgacggcagcgaggggcgcgta
gcgaacctcaccgtcggcgacgagacggggcgcgtgcgcgtaacgctgtgggacggcaag
gccgacctcgccgaggagttcgaggccggcgaggtcgtcgaggtcggcgacggctacgtc
cgcgagcgcgacggggacttggagctccacgtcggcgaccgcggcaccgtcgagcgcgtc
gacgaggacgtcgagtacgtcccggagacgacggacatcgccgacctggagatcggcgaa
accgtcgacgtcggcggcggcgtcatcgagacggacccggtgcgcaccttcgaccgcgac
gacggcagcgaggggcaggtgcgcaacgtccggatcaaagacgagacgggcgagatccgc
gtcgcgctgtggggcgacaaggccgaccgcgagatcgacctcgccgaccgcgtcgtcttc
accgacgtcgagatccaggacggctggcaggacgacctcgaggcgtccgcgaactggcgc
tcgaccgtcaccgtcctcgacgaggggagcgacgcggcggccggcgtcgcggacggggcg
tcggccgcgagcgccgctggaggcaacgaggccggcgggagcgacgaccgcgacgcggac
gagaccggtctcggcgccttcgccgaggacggacggaaggcggccgccgaggccgtcgcc
ggcgagagcggcgagggcgaagcggggagcgcgagcggcggcgccgcggccgcgacggcg
gaggcgtcgggcgaggacgtcgagttcaccgggacggtcgtccagaccggcgacccggtc
gtcctcgacgacggccagcggacgaggacggtcgacaccgacgcgagcctccggctcggc
gaggaggtaacggtccgcgggccggagcgagacggcaccatcgacgcggacgacgtgttc
tga
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integrated database retrieval system
