Halorubrum ruber: J7656_00865
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Entry
J7656_00865 CDS
T07186
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hss
Halorubrum ruber
Pathway
hss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J7656_00865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hss03021
]
J7656_00865
Transcription machinery [BR:
hss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
J7656_00865
Prokaryotic type
Archaeal type
TFB
J7656_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cas12f1-like_TNB
DZR
zf-C2HC_3
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
QUO47955
UniProt:
A0A8T8LM55
LinkDB
All DBs
Position
185726..186751
Genome browser
AA seq
341 aa
AA seq
DB search
MSDAPSTRVRSPRTETDDTATADRAATADRAATTEQVSAGEESETPAAEESGDRETCPEC
GGRTRVDGAERVCADCGLVVEADRIDHGPEWRSFDDDDTNPKRTGAPLTRSRHDRGLSTE
IGRSTKVKGRKRRRLARMRTQHNRAQISTKRDRNKVYAYTEIRRLTGVMGLPDSVRDAAC
ALFDSAQEESLLRGRSLEGFAAACVYVACRTADVARTVGEVCAEAKATEAEHRAAFDAMN
RELGLPIAPSGPAEYLPRFASDLGCDPAVERRAGELAERAVEEGIANGRNPVGVAAACLY
TAARELDEECTQQEAADVADVTPVTVRRTYVDLTEESVTHD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgcaccctcgacccgcgttcgttcgccccggaccgagaccgacgataccgcg
accgccgaccgcgctgcgaccgctgaccgcgcggcgaccacggagcaggtctcggcgggc
gaggagtccgagacgccggccgccgaggagagcggcgaccgcgagacgtgtcccgagtgc
ggcggccgcacgcgcgtcgacggcgcggagcgcgtctgcgccgactgcgggctcgtcgtc
gaggccgaccggatcgaccacggccccgagtggcggtcgttcgacgacgacgatacgaac
cccaagcgcaccggcgcccccctgacgcgctcccgccacgaccgcgggctctcgactgag
atcggccgctcgacgaaggtgaaggggcgcaagcgccgccggctcgcccggatgcggacc
cagcacaaccgcgcgcagatctcgacgaagcgcgaccggaacaaggtgtacgcctacacc
gagatccggcggctcaccggggtcatggggttacccgacagcgtccgcgacgccgcctgc
gcgctgttcgactcggcgcaagaggagagcctgctccgcgggcgctcgctcgaagggttc
gccgcggcctgcgtctacgtcgcctgccgcaccgccgacgtggcccgtaccgtcggcgag
gtgtgcgccgaggcgaaggcgacggaggccgagcaccgggccgccttcgacgccatgaac
cgcgagctcggcctgccgatcgccccgagcggtcccgcggagtacctcccgcggttcgcc
agcgacctcggctgcgacccggccgtcgagcgccgcgcaggcgaactggccgagcgcgcc
gtcgaggaggggatcgcgaacggccgcaaccccgtcggcgtcgccgccgcctgcctctac
accgcggcccgcgagctcgacgaagagtgtacccagcaggaggccgccgacgtcgccgac
gtgacgcccgtgacggtccgacggacgtacgtggacctaaccgaggagtcagtgacccac
gactga
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