Halorubrum ruber: J7656_01530
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Entry
J7656_01530 CDS
T07186
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hss
Halorubrum ruber
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hss03016
]
J7656_01530 (thpR)
Enzymes [BR:
hss01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
J7656_01530 (thpR)
Transfer RNA biogenesis [BR:
hss03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
J7656_01530 (thpR)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QUO48070
UniProt:
A0A8T8LMP9
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All DBs
Position
complement(320103..320678)
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AA seq
191 aa
AA seq
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MRAFFAVDLPDSLAPAVADAQAPFADAAGVNPVDPEKAHVTLKFLGEIGGRDDETEPTVD
DVIAAGERAVDRAAVGPFKCTIADLGVFPNREYISVAWAGVDSGTEELTALHEALEAETT
ALGVDPEEHEFTPHVTLARVENGTGAEAVRGALDADDPEIGSFAVDEIRLMRSTLTESGP
EYDVVRGFDLG
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgttcttcgccgtcgacctcccggactcgctcgcgccggccgtcgcggacgcg
caggccccgttcgcggacgcggccggcgtcaacccggtcgaccccgaaaaggcccacgtg
acgctgaagttcctcggcgagatcggcggacgcgacgacgagaccgaaccgacggtcgac
gacgtgatcgcggccggcgagcgcgcggtcgaccgcgccgccgtcggcccgtttaaatgt
accatcgccgacctcggcgtcttcccgaaccgcgagtacatctccgtcgcctgggccggg
gtcgacagcgggaccgaggaactcaccgcgctccacgaggcgctcgaagcggagacgacc
gcgctcggcgtcgacccggaagagcacgagttcaccccgcacgtcacgctggcccgggtc
gagaacgggaccggcgccgaggcggtccgcggcgcgctcgacgccgacgaccccgaaatc
gggagcttcgcggtcgacgagatccgactgatgagatcgacgctgaccgagtcggggccc
gagtacgacgtcgtccgggggttcgacctcgggtga
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