Halorubrum ruber: J7656_03160 Help Entry J7656_03160       CDS       T07186                                  Name (GenBank) CDC48 family AAA ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism hss  Halorubrum ruber Pathway hss04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:hss00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     J7656_03160  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hss03019]     J7656_03160    03009 Ribosome biogenesis [BR:hss03009]     J7656_03160    04131 Membrane trafficking [BR:hss04131]     J7656_03160   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:hss04147]     J7656_03160 Messenger RNA biogenesis [BR:hss03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      J7656_03160 Ribosome biogenesis [BR:hss03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     J7656_03160 Membrane trafficking [BR:hss04131]  SNARE   SNARE associated proteins    Others     J7656_03160  Autophagy   Aggrephagy    Other aggrephagy associated proteins     J7656_03160 Exosome [BR:hss04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    J7656_03160 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_2 TIP49 AAA_5 AAA_33 AAA_14 AAA_22 NPHP3_N nSTAND3 AAA_28 AAA_7 RNA_helicase AAA_lid_PRS2_C Mg_chelatase NB-ARC AAA_3 IstB_IS21 DUF815 ABC_tran Sigma54_activat AAA_18 SLFN-g3_helicase AAA_17 Parvo_NS1 TsaE Zeta_toxin AAA_30 AAA_11 AAA_24 PhoH AAA_19 Vps4_C bpMoxR ATPase_2 Bac_DnaA Zot Molydop_binding HJURP_C Motif Other DBs NCBI-ProteinID:  QUO48368 UniProt:  A0A8T8LN57 LinkDB All DBs Position complement(655027..657294) Genome browser AA seq 755 aa AA seqDB search MKLTVKPLKQKDAGRRLAAIDRVAADELGLSGGDIVRVEGADGAAIARVWPGYPEDDGTG VIRIDGRLRQEADVGIDDRVTVEDVDVSRADAVTIAFPSQLRVRGQIAPFIRDKLSGQPV TEGQTIRTSLGFGLMGGQSQAVPMKIAETSPSGTVVITDETEISISEISAEEIADRGDAP GGTGEGPDVTYEDIGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKT LIAKAVANEIDANFHTISGPEIMSKYYGESEEQLREVFEEAAEESPSIIFMDELDSIAPK REEAGGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEVGVP DRDGRKEILQVHTRNMPLTDGVDLDEYAENTHGFVGADLESLAKESAMHALRRIRPEIDL ESDEIDADVLNSIQVTEADFKEAIKGIEPSALREVFVEVPDVTWDDVGGLEGTKERLRET IQWPLEYPEVFEELDMQAAKGVLMYGPPGTGKTLLAKAVANESESNFISIKGPELLNKYV GESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNSGDSGVGERVVSQLLTELDGLES LEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDETARRRIFEVHTRNKPLADDVDLD ALARKTEGYVGADIEAVAREASMNASREFIGSVTREEVGESVGNVRVTMAHFEDALNEVN PSVTPETRERYEEIEKQFQRSEVNRDEAEPGAAFQ NT seq 2268 nt NT seq  +upstreamnt  +downstreamnt atgaagctcaccgtcaagccgctgaaacagaaggacgccggccgccgcctcgcggcgatc gaccgcgtcgcggccgacgagctcgggctctccggcggggacatcgtccgcgtcgagggc gccgacggggccgcgatcgcccgggtctggcccggctaccccgaggacgacggcaccggc gtgatccgcatcgacggccgcctccggcaggaggccgacgtggggatcgacgaccgcgtg accgtcgaggacgtcgacgtctcccgcgcagacgcggtgacgatcgccttcccgagccaa ctgcgggtgcggggccagatcgccccgttcatccgcgacaagctctccggccagcccgtg accgagggacagacgatccggacctccctcggcttcgggctgatgggcggtcagtcgcag gccgtcccgatgaagatcgccgagacaagcccgagcggcacggtcgtcatcaccgacgag acggagatcagcatctccgagatctccgccgaggagatcgccgaccgcggcgacgccccg ggcggcaccggcgaggggcccgacgtcacctacgaggacatcggcgggctcgacgacgag ctcgaacaggtccgcgagatgatcgagctgccgatgcggcacccggagctgttcaagcgc ctcggcatcgacccgccgaagggcgtgctgctccacggcccgccgggcacggggaagacg ctgatcgcgaaggcggtcgccaacgagatcgacgcgaacttccacacgatctccggcccg gagatcatgtcgaagtactacggcgagagcgaagagcagctccgcgaggtgttcgaggag gcggccgaggagtcgccgtcgatcatcttcatggacgagctggactccatcgcgcccaag cgcgaggaggccggcggcgacgtggagcgccgcgtcgtggcccagctcctctcgctgatg gacgggctcgaggagcgcggcgaggtcgtcgtcatcggggcgacgaaccgcgtcgacgcc atcgaccaggcgctccgacggggcggccgcttcgaccgcgagatcgaggtcggcgtcccc gaccgcgacggccgcaaggagatcctgcaggtccacacgcggaacatgccgctgaccgac ggggtcgacctcgacgagtacgccgagaacacccacggcttcgtcggggccgacctcgag tcgctggcgaaggagtccgcgatgcacgcgctgcggcgtatccggccggagatcgactta gagagcgacgagatcgacgccgacgtgctgaacagcattcaggtgaccgaggcggacttc aaggaggcgatcaaggggatcgaaccctccgcgctgcgcgaggtgttcgtggaggtcccc gacgtcacctgggacgacgtgggcggcctcgagggcaccaaagagcggctccgcgagacg atccagtggcccttagagtaccccgaggtgttcgaggagctcgacatgcaggccgcgaag ggcgtcctgatgtacggcccgccgggcacggggaagaccctgctcgcgaaggccgtcgcc aacgagagcgagtcgaacttcatctcgatcaaggggcccgagctgctgaacaagtacgtg ggcgagtccgagaagggcgtccgcgaggtgttcagcaaggctcgcgagaacgcgccgacg atcgtgttcttcgacgagatcgactcgatcgcgaccgagcgcgggaagaactccggcgac tccggcgtcggcgagcgcgtcgtctcccagctgctgacggagctcgacgggctcgagtcg ctggaggacgtcgtcgtcatcgcgacgacgaaccgcccggacctcatcgactcggcgctg ctgcgtcccggccgcttagaccggcacgtccacgtgcccgtccccgacgagacggcccgc cgccggatcttcgaggtccacacgcggaacaagccgctggccgacgacgtcgacctcgac gcgctggcccgcaagaccgaggggtacgtgggcgccgacatcgaggcggtcgcccgcgag gcgtcgatgaacgcctcccgggagttcatcggcagcgtcacgcgcgaggaggtcggcgag tccgtcggcaacgtccgcgtgacgatggcgcacttcgaggacgcgctgaacgaggtgaac ccgagcgtcacccccgaaacgcgcgagcggtacgaggagatagaaaagcagttccagcgg tcggaggtcaaccgcgacgaggccgaaccgggcgcggcgttccagtaa

DBGET integrated database retrieval system