Halorubrum ruber: J7656_03875
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Entry
J7656_03875 CDS
T07186
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hss
Halorubrum ruber
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hss03009
]
J7656_03875
Ribosome biogenesis [BR:
hss03009
]
Prokaryotic type
ribosomal protein modification factors
J7656_03875
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Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QUO48504
UniProt:
A0A8T8LP52
LinkDB
All DBs
Position
complement(795065..796756)
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AA seq
563 aa
AA seq
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MDIGLVGDGPAVEATEAALGDVDVNAMPVEADLLDGFDLAVVVDTAGSSTFATANELLDR
WIAVEVGGLGGVPLDDLDAAVTVFDDACYDCLRVRVESGGPEPADAPAGRRSAVRYAGAV
AGRRAIRLLAGDPVADTVVEVPGAERTLLPAPGCGCGADPGDALPRDHADRRLDDAIDRA
ERAVDPRIGALREVGEQESFPLPYYVARVADTTPFSDADAADFGGGAAADWDAAFMKALG
EGLERYAAGVYREAEFTRAPAANVPNPVTPDAFVRPDGAEAYDRDDRLPWVRGESLVTGD
PASLPAEFVGFPPPENRYRPAITTGLGLGSSGPDAALSGLYEAIERDATMTSWYSTTEPL
GLDLDDPGFAELEKRARAESLSVTPLLVTTDVDVPVVAVGVSRTGDWPRFAAGSGADLDP
AAAARSALAEALQNWTELRSMGREAADEQGAAIGHHADRPAETAAFFDPDATVSAEGLGE
PELSGTEELDAAIDRVESVGLDPYVARVTTRDLEALGFEAVRVLVPGAQPLFTGEPFFGD
RASEVPRSMGFEPALDRPYHPFP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggacttgtcggcgacgggcccgcggtcgaggcgaccgaggccgcgctcggc
gacgtcgacgtgaacgcgatgcccgtcgaggccgacctgctcgacgggttcgacctcgcg
gtcgtcgtcgacaccgccggctcgtcgacgttcgcgaccgcgaacgagctgctcgaccgt
tggatcgccgtcgaggtgggtgggctcggcggcgtccccctcgacgacctcgacgccgcg
gtgaccgtcttcgacgacgcctgctacgactgcctgcgcgtccgcgtcgagagcggcggc
ccggagccggcggacgcgccggccggccgtcggtccgcggtgcgctacgccggcgcggtg
gccgggcgacgggcgattcgactcctcgccggcgacccggtggccgacaccgtcgtcgag
gtgccgggcgccgagcggacgctgctgcccgcgccgggctgcggctgcggcgcggaccca
ggcgacgcgctcccgcgcgaccacgcggaccggaggctcgacgacgcgatcgaccgcgcg
gagcgggccgtcgacccccggatcggcgcgctgcgcgaggtcggcgagcaggagtcgttc
ccgctgccgtactacgtcgcgcgggtggcggacacgacccccttctccgacgccgacgcg
gccgacttcggcggcggcgcggccgccgactgggacgccgcgttcatgaaggcgctcggc
gaggggttagagcggtacgcggccggcgtctaccgcgaggccgagttcacgcgcgcgccg
gccgcgaacgtcccgaacccggtcaccccggacgcgttcgtccgccccgacggcgccgag
gcgtacgaccgcgacgaccggctcccgtgggtccgcggcgagtcgctcgtgactggcgac
cccgcgagcctcccggcggagttcgtcggcttcccgccgccggagaaccggtatcgcccg
gcgatcacgacgggactcgggctcggtagctccggacccgacgccgcgctctccgggctg
tacgaggcgatcgagcgcgacgcgacgatgaccagctggtactccacgacggagccgctc
gggctcgacctcgacgaccccggcttcgccgagctggagaagcgggcccgcgcggagtcg
ctgtcggtgaccccgctgctcgtcacgaccgacgtcgacgtgccggtcgtcgcggtcggc
gtgagtcgaacgggcgactggccgcggttcgccgcggggtcgggcgccgacctcgacccg
gccgcggcggcgcggagcgcgctcgcggaggcgctccagaactggaccgagctccgctcg
atggggcgggaggcggccgacgagcagggcgccgcgatcggtcaccacgccgaccgcccc
gcggagacggccgcgttcttcgacccggacgcgaccgtctcggccgaggggctcggcgag
ccggagctgtcggggaccgaggagctcgacgccgcgatcgaccgcgtcgagagcgtcggg
ctcgacccgtacgtcgcgcgggtgacgacccgcgacctcgaagcgctggggttcgaggcc
gtccgcgtcctagttcccggcgcgcagccgctgttcaccggcgagccgttcttcggcgac
cgcgcgagcgaggtgccgcggtcgatggggttcgagcccgcgctcgaccgaccgtaccac
ccgttcccgtga
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