KEGG   Halorubrum ruber: J7656_04880
Entry
J7656_04880       CDS       T07186                                 
Name
(GenBank) AAA family ATPase
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
hss  Halorubrum ruber
Pathway
hss03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hss00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J7656_04880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hss03032]
    J7656_04880
Enzymes [BR:hss01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     J7656_04880
DNA replication proteins [BR:hss03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    J7656_04880
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     J7656_04880
SSDB
Motif
Pfam: AAA_12 AAA_11 Dna2 AAA_30 AAA_19 Viral_helicase1 UvrD-helicase UvrD_C_2 AAA_16 ResIII AAA_22 Cas_Cas4 SLFN-g3_helicase Helicase_RecD NPHP3_N PhoH AAA_7 AAA bpMoxR AAA_5 Mg_chelatase nSTAND3 AAA_25
Other DBs
NCBI-ProteinID: QUO48687
UniProt: A0A8T8LNN1
LinkDB
Position
complement(988033..990807)
AA seq 924 aa
MNVRGPIVSVGEARTVSTSYGERDLRELRVRPDRGAGDPVDVTLWGKWTETAEHAEPGME
LLVTDPEEDEYRGETGYATTDESWVVLQPDFLVDVTGIRSWVQCPRMYYLNKLSGVPLNY
PVVKGTIVHEVFGDLLRGVELEESIEDRVAEAGLELGLLGYETEEVEDEVRRNAAAVEGW
LAQGTLSDEDTWRSEFTLISPTFGLKGRADALRRGTPVELKTGKNTKREPRFHDKVQAAC
YALMLDERGVDPDIGTLLYTKNTALDRNEESGDLAPAKEFTVGRGFLEFVVRERNALAAM
EWRALNDPGERPTVPTGYEADATCSYCFEQDTCMVVSGRLDQESKAGQVGTPVPDAERDY
FDRFYVALEEERRETHAEYRKLWEQTPEERAADDRALIDLEPVAQTEIDDARWELRARKP
GDAVSKLREGDVALASDGDPVSGHAELGRITELGKDEVVVETDEPVELRRLDVYPSEISV
DRSLTALHDAVLKGDPDRKDVIFGRREPEFRDPAERPPGSPGSGDADGPDAPEAYIDNNA
SQNEAVELAVDAEDLALIHGPPGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEA
LRDQGFEDWVASSRPDGAGETGGILRVGTETGVRGDMQDVRLVQRGEPNAKAAELRDAPV
VAATTAACGSRVMRECEFDVALVDEASQLTEPGTHAAINRADRFVLVGDHEQLPPVVRAE
NDLQTSLFQRLIEEYPDASVMLDRQYRMSQRIQAFASAEFYDGALRPATPEVAGQTLADL
GVDPDALAPELTGGVGFVDPDGERDGNRNVREAERVAAVVDAYVAAGVDPDDIGVIAPFR
AQVAEIGRRTDVTVDTVDRFQGSSKEVILVSFVATGDLDGPIFEDHRRINVALTRAKKQL
TLVGDADALGSDPFYERVLDWARR
NT seq 2775 nt   +upstreamnt  +downstreamnt
gtgaacgttcgcgggccgatcgtctccgtcggggaggcgcggacggtgtcgacgtcgtac
ggcgagcgcgacctccgcgagctgcgggtccggcccgaccgcggcgcgggcgatccggtc
gacgtgacgctgtgggggaagtggacggagacggccgagcacgctgaaccggggatggaa
ctgctcgtcaccgacccggaagaagacgagtaccgcggcgagacgggatacgcgacgacc
gacgagtcgtgggtcgtcctccagcccgacttcctcgtcgacgtgaccgggatccggtcg
tgggtccagtgcccgcggatgtactatttaaataagctctccggggtcccgctcaactac
ccggtcgtcaaggggacgatcgtccacgaggtgttcggggacctactccgaggcgtggag
ctggaggagtcgatcgaggaccgcgtcgcggaggccggcctcgaactcggcctcttaggc
tacgagacggaggaggtcgaagatgaggtgcgccgcaacgccgccgccgtcgaggggtgg
ctcgcgcagggcaccctgagcgacgaggacacgtggcgctcggagttcacgctcatctcg
cccacgttcggtttaaaagggcgggcggacgcgctccgacgcggcacccccgtcgagctg
aagaccgggaagaacaccaagcgggagccgcggttccacgacaaggttcaggcggcctgc
tacgcgctcatgctcgacgagcgcggcgtcgatccggacatcgggacgctgctgtacacg
aagaacaccgccctcgaccgcaacgaggagtcgggcgacctcgcgcccgccaaggagttc
accgtcgggcggggcttcctggagttcgtcgtgcgcgagcgcaacgccctcgccgcgatg
gagtggcgcgcgctcaacgaccccggcgagcgccccaccgtcccgacggggtacgaggcg
gacgcgacgtgcagctactgcttcgagcaggacacgtgtatggtcgtctccggccgcctc
gatcaggagtcgaaggcagggcaggtcgggacgcccgtgcccgacgcggagcgcgactac
ttcgaccgcttctacgtcgccttggaggaggagcgccgcgagactcacgccgagtaccgg
aagctgtgggagcagaccccggaggagcgggcggccgacgaccgcgcgctgatcgacctc
gaaccggtcgcgcagacggagatcgacgacgcgcgctgggagctccgcgcccggaagccc
ggcgacgccgtctcgaagctccgcgagggcgacgtggcgctcgcgagcgacggcgaccca
gtctccggccacgccgaactcgggcggatcaccgaactcgggaaagacgaggtcgtcgtc
gagacggacgagccggtcgagctgcgccggctcgacgtctacccctccgagatctccgtc
gaccgatcgctcaccgcgctccacgacgccgtgctgaagggcgaccccgaccgcaaggac
gtgatcttcggccggcgcgaaccggagttccgggacccggccgagcgcccgccgggcagt
cccgggagcggcgacgcggacggcccggacgcgcccgaggcgtacatcgacaacaacgcg
tcccagaacgaggcggtcgaactcgcggtcgacgccgaggacctggcgctgatccacggg
ccgccgggcaccgggaagacgtacaccatcgcgcggacgatccgggcgctcgtggcggag
gggaaccgggtgctgctgtcggcgttcacgaaccgcgcggtcgacaacgccctcgaagcg
ctgcgcgaccaggggttcgaggactgggtcgcgtcttcgcgaccagatggagccggtgaa
accggcggaatcctgcgcgtcggcaccgagaccggcgtccgcggtgacatgcaggacgtg
cggctcgtccagcgcggtgagccgaacgcgaaggcggccgagctgcgggacgcaccggtc
gtcgccgcaacgaccgctgcctgcggctcccgggtcatgcgcgagtgcgagttcgacgtg
gcgctcgtcgacgaggcctcccagctcacggagcccggaacccacgccgcgatcaaccgc
gcggaccggttcgtcctcgtcggcgaccacgagcagctcccgccggtcgtccgcgccgag
aacgacctccagacctccctcttccagcgcctcatcgaagagtatccggacgcgagcgtg
atgctcgaccgccagtaccggatgagccagcgcatccaggcgttcgcctccgcggagttc
tacgacggcgcgctccggcccgccacgcccgaagtggccgggcagacgctcgcggatctc
ggcgtcgaccccgacgcgctcgcgcccgagctgacgggcggcgtggggttcgtcgacccc
gacggcgagcgcgacggcaaccggaacgtccgcgaggccgagcgcgtcgccgcggtcgtc
gacgcctacgtcgccgccggcgtcgatccggacgacatcggcgtcatcgccccgttccgc
gcgcaggtcgcggagatcggtcgccggaccgacgtgaccgtcgacaccgtcgaccgcttc
cagggctcctcgaaggaggtcatcctcgtctccttcgtcgcgaccggcgacctcgacggc
cccatcttcgaggaccaccgccggataaacgtcgcgctcacccgggcgaaaaagcagctg
acgctcgtcggcgacgccgacgcgctcggctccgacccattctacgagcgggtgctcgac
tgggcgcggcggtga

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