KEGG   Halorubrum ruber: J7656_05865
Entry
J7656_05865       CDS       T07186                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hss  Halorubrum ruber
Pathway
hss03030  DNA replication
hss03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hss00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J7656_05865 (fen)
   03410 Base excision repair
    J7656_05865 (fen)
   03450 Non-homologous end-joining
    J7656_05865 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hss03032]
    J7656_05865 (fen)
   03400 DNA repair and recombination proteins [BR:hss03400]
    J7656_05865 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hss04147]
    J7656_05865 (fen)
DNA replication proteins [BR:hss03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    J7656_05865 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     J7656_05865 (fen)
DNA repair and recombination proteins [BR:hss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     J7656_05865 (fen)
Exosome [BR:hss04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   J7656_05865 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: QUO48867
UniProt: A0A8T8LP56
LinkDB
Position
complement(1185247..1186224)
AA seq 325 aa
MGNADLRDLASIRDVPFEEIEGSVVAVDAHNWLYRYLTTTVKWTSDEKYTTADGTEVANL
IGVVQGLPKFFEHDLIPVMVFDGAVTDLKADEVAERREKREQAEERRAAAEERGDAVEAA
RLEARTQRLTDTIQETTRELLELLDVPIVEAPAEGEAQCAHMAATGAVDHAGSEDYDTLL
FGAPTTLRQLTSKGDPELMDLAATLEDLDLDRQGLVDVAMLCGTDFNEGVRGIGPKTAVT
AVKEHGDLWGVLEARDAEIPNAEAIRELFMDPPAEDVAVDADVNPDVEAARAYVVDEWGV
DADEVERGFERIAESQVQTGLDRWT
NT seq 978 nt   +upstreamnt  +downstreamnt
atgggaaacgccgacctgcgcgacctcgcgtcgatccgcgacgtccccttcgaggagata
gaggggagcgtcgtcgccgtcgacgcgcacaactggctgtaccgctacctcacgacgacg
gtcaagtggacgagcgacgagaagtacaccaccgccgacggcaccgaggtcgcgaacctg
atcggggtcgtccaagggctcccgaagttcttcgagcacgacctgatcccggtgatggtg
ttcgacggcgccgtcaccgacctgaaggcagacgaggtggccgagcgccgcgagaagcgc
gagcaggccgaggagcggcgagcagcggccgaggagcgcggcgacgcggtcgaggccgcg
cgcttagaggcccgcacacagcggctcaccgacacgattcaggagacgacccgcgagctg
ctcgaactgctcgacgtgccgatcgtcgaggcgcccgcggaaggggaggcgcagtgcgcg
cacatggccgcgaccggcgccgtcgaccacgcgggcagcgaggactacgacaccctgctg
ttcggcgcgccgacgacgctccgccagctgacgagcaagggcgacccggagctgatggac
ctcgcggcgaccctcgaagacctcgacctcgaccgtcaggggctcgtcgacgtcgcgatg
ctctgcggcaccgacttcaacgagggcgttcgcgggatcgggccgaagacggcggtaacg
gcggtgaaagaacacggcgacctgtggggcgttctggaggcccgcgacgccgagatcccg
aacgccgaggcgatccgggagctgttcatggacccgccggccgaggacgtcgcggtcgac
gccgacgtgaacccggacgtcgaggccgcccgcgcgtacgtcgtcgacgagtggggcgtc
gacgccgacgaggtcgagcgcgggttcgagcgcatcgcggagtcgcaggtccagaccggg
ctcgaccggtggacctga

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