Halorubrum ruber: J7656_05865
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Entry
J7656_05865 CDS
T07186
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hss
Halorubrum ruber
Pathway
hss03030
DNA replication
hss03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J7656_05865 (fen)
03410 Base excision repair
J7656_05865 (fen)
03450 Non-homologous end-joining
J7656_05865 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hss03032
]
J7656_05865 (fen)
03400 DNA repair and recombination proteins [BR:
hss03400
]
J7656_05865 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hss04147
]
J7656_05865 (fen)
DNA replication proteins [BR:
hss03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
J7656_05865 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
J7656_05865 (fen)
DNA repair and recombination proteins [BR:
hss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
J7656_05865 (fen)
Exosome [BR:
hss04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
J7656_05865 (fen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QUO48867
UniProt:
A0A8T8LP56
LinkDB
All DBs
Position
complement(1185247..1186224)
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AA seq
325 aa
AA seq
DB search
MGNADLRDLASIRDVPFEEIEGSVVAVDAHNWLYRYLTTTVKWTSDEKYTTADGTEVANL
IGVVQGLPKFFEHDLIPVMVFDGAVTDLKADEVAERREKREQAEERRAAAEERGDAVEAA
RLEARTQRLTDTIQETTRELLELLDVPIVEAPAEGEAQCAHMAATGAVDHAGSEDYDTLL
FGAPTTLRQLTSKGDPELMDLAATLEDLDLDRQGLVDVAMLCGTDFNEGVRGIGPKTAVT
AVKEHGDLWGVLEARDAEIPNAEAIRELFMDPPAEDVAVDADVNPDVEAARAYVVDEWGV
DADEVERGFERIAESQVQTGLDRWT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgccgacctgcgcgacctcgcgtcgatccgcgacgtccccttcgaggagata
gaggggagcgtcgtcgccgtcgacgcgcacaactggctgtaccgctacctcacgacgacg
gtcaagtggacgagcgacgagaagtacaccaccgccgacggcaccgaggtcgcgaacctg
atcggggtcgtccaagggctcccgaagttcttcgagcacgacctgatcccggtgatggtg
ttcgacggcgccgtcaccgacctgaaggcagacgaggtggccgagcgccgcgagaagcgc
gagcaggccgaggagcggcgagcagcggccgaggagcgcggcgacgcggtcgaggccgcg
cgcttagaggcccgcacacagcggctcaccgacacgattcaggagacgacccgcgagctg
ctcgaactgctcgacgtgccgatcgtcgaggcgcccgcggaaggggaggcgcagtgcgcg
cacatggccgcgaccggcgccgtcgaccacgcgggcagcgaggactacgacaccctgctg
ttcggcgcgccgacgacgctccgccagctgacgagcaagggcgacccggagctgatggac
ctcgcggcgaccctcgaagacctcgacctcgaccgtcaggggctcgtcgacgtcgcgatg
ctctgcggcaccgacttcaacgagggcgttcgcgggatcgggccgaagacggcggtaacg
gcggtgaaagaacacggcgacctgtggggcgttctggaggcccgcgacgccgagatcccg
aacgccgaggcgatccgggagctgttcatggacccgccggccgaggacgtcgcggtcgac
gccgacgtgaacccggacgtcgaggccgcccgcgcgtacgtcgtcgacgagtggggcgtc
gacgccgacgaggtcgagcgcgggttcgagcgcatcgcggagtcgcaggtccagaccggg
ctcgaccggtggacctga
DBGET
integrated database retrieval system