Halorubrum ruber: J7656_07660
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Entry
J7656_07660 CDS
T07186
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hss
Halorubrum ruber
Pathway
hss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J7656_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hss03021
]
J7656_07660
Transcription machinery [BR:
hss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
J7656_07660
Prokaryotic type
Archaeal type
TFB
J7656_07660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Zn_ribbon_3
Sigma70_r4
Ribosomal_S27e
DUF5817
Zn_Ribbon_YjdM
Cyclin_C
Cas12f1-like_TNB
Zn_ribbon_6
Trm112p
Motif
Other DBs
NCBI-ProteinID:
QUO46508
UniProt:
A0A8T8LI12
LinkDB
All DBs
Position
complement(1540658..1541611)
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AA seq
317 aa
AA seq
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MERPSRQRQQERDTEQETDESTVSCPECDSENIVTDADQELVCEDCGLVLDERNIDRGPE
WRAFNHNERQSKSRVGAPITETMHDKGLTTTIDWKDKDAYGRSLSSEKRSQMHRLRKWQE
RIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEGVSTA
ALYAACRQEGIPRSLDEVADVSRVPQKEIGRTYRYISQELGLELKPVDPKQFVPRFASSL
QLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVAQVTE
VTIRNRYQEQIEAMGFR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtccgagtcgccaacggcaacaggagcgagacacggagcaggaaacggacgaa
tcgacggtctcctgtccggagtgtgactcggagaacatcgtcaccgacgccgaccaagag
ctcgtctgcgaggactgcgggctcgtcttagacgagcggaacatcgaccgcgggccggag
tggcgcgcgttcaaccacaacgagcggcagtcgaagtcgcgcgtcggcgcccccatcacg
gagacgatgcacgacaaggggctgacgacgacgatcgactggaaggacaaggacgcctac
gggcggtcgctctcctcggagaaacgctcgcagatgcatcgcctgcgcaagtggcaggag
cggattcggaccaaagacgcgggcgagcgcaacctccagttcgcgctctcggagatcgac
cggatggcgagcgcgctcggggtcccgcgctcggtacgagaggtcgcctcggtcatctat
cgacgcgcgctcaacgaggacctcatccgggggcgctccatcgagggcgtctccaccgcc
gcgctgtacgccgcctgccgccaggaggggatcccgcgcagcctcgacgaggtcgcggac
gtctcgcgggtcccgcagaaggagatcggccggacctatcggtacatctcccaagagctc
ggcttagagctgaagccggtcgaccccaagcagttcgtcccgcggttcgcctcgtcgctc
cagctctccgaggaggtccagtcgaaggcgaccgagatcatcgacgtctccgccgagcag
ggactgctctccgggaagtcgcccaccggcttcgcggcggccgccatctacgcggcctcg
ctgctctgtaacgagaagaagacccagcgcgaggtcgccgacgtcgcgcaggtcaccgag
gtcaccatccgcaaccggtatcaggagcagatcgaagcgatgggcttccgctag
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