Halorubrum ruber: J7656_08970
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Entry
J7656_08970 CDS
T07186
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hss
Halorubrum ruber
Pathway
hss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J7656_08970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hss03021
]
J7656_08970
Transcription machinery [BR:
hss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
J7656_08970
Prokaryotic type
Archaeal type
TFB
J7656_08970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Trm112p
Zn_ribbon_tTFIIB
Anti-TRAP
DZR
HypA
Zn_ribbon_LysW
HTH_Tnp_ISL3
Cyclin_C
Auto_anti-p27
A2L_zn_ribbon
DZR_2
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
QUO46747
UniProt:
A0A8T8LI96
LinkDB
All DBs
Position
complement(1807172..1808149)
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AA seq
325 aa
AA seq
DB search
MSENLRTYTTETVDDENESESETEDEELRCPECGGQLATDTEHGETVCVDCGLVVEEDEI
DRGPEWRAFDSKEKDNKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGKSLSSRQREKMQRL
RTWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALDEDLLPGRSIE
GVSTASLYAAARQAGTPRSLDEIAGVSRVEKDEIARTYRYVVRELKLEIQPADPESYVPR
FASDLGLSDEAERRARSLLDTAKEQGIHSGKSPVGLAAAAVYAASLLVNEKVTQSEVSEV
ANISEVTIRNRYHELLEAEDSVALN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaaccttcgaacgtacacgacagagaccgtcgacgacgagaacgagagcgag
tcggagaccgaagacgaggagctgcggtgccccgagtgcggcggccagctcgcgacggac
acggagcacggcgagaccgtctgcgtcgactgcgggctcgtcgtcgaggaggacgagatc
gaccgcgggccggagtggcgcgcgttcgactccaaggagaaggacaacaagtcccgggtc
ggggccccgacgacgaacatgatgcacgacaaggggctctcgacgaacatcggctggcag
gacaaagacgcctacggcaagtcgctgtccagccgccagcgggagaagatgcagcggctg
cggacgtggaacgagcggttccgcacccgcgactccaaggagcgcaacctcaagcaggcg
ctcggcgagatcgaccggatggcctccgcgctcggcctcccggacaacgtccgcgagacg
gcctcggtcatctaccgccgcgcactcgacgaggacctcctccccggccgctccatcgag
ggcgtctccacggcctcgctgtacgccgccgcgcggcaggcgggcacgccgcgcagcctc
gacgagatcgcgggcgtctcccgggtcgagaaggacgagatcgcgaggacgtaccgctac
gtcgtccgcgagctcaagctggagatccagcccgccgaccccgagagctacgtgccccgg
ttcgcctccgacctcggcctctccgacgaggccgagcgccgcgcccgcagcctgctcgac
acggcgaaagagcaggggatccactccggcaagtcgccggtcgggctcgccgccgccgcc
gtctacgccgcctcgctgctcgtcaacgagaaggtgacccagagcgaggtcagcgaggtc
gcgaacatcagcgaggtcaccatccggaaccggtaccacgaactcctcgaggccgaggac
tcggtcgcgctgaactga
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integrated database retrieval system
