Halorubrum ruber: J7656_11440
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Entry
J7656_11440 CDS
T07186
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hss
Halorubrum ruber
Pathway
hss03420
Nucleotide excision repair
hss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J7656_11440
03430 Mismatch repair
J7656_11440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hss03400
]
J7656_11440
Enzymes [BR:
hss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J7656_11440
DNA repair and recombination proteins [BR:
hss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J7656_11440
MMR (mismatch excision repair)
Other MMR factors
J7656_11440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QUO47188
UniProt:
A0A8T8LJX3
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All DBs
Position
2308698..2310707
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AA seq
669 aa
AA seq
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MPGEPTDYDAATDYEDAAPPEAVRSGLPEELKDAQIKGGETYPVTDSIRLNGPPGVGKTT
QVCLRVSTLITEYDIDPSDVTIVTYRRSLADEIGDRLKSWGVIDDDADLSMWTTAHACAN
RVTGLLSRDKGSANDYQQNSGRGLGPAVTTYEQSYFCSDVLNIRYWSGQPWESTRGQLLF
DVFEYAANNLLDPRDEGDLREIPAYDDLREEWPGVDVATVYEQWQQFKGHQDLVEFHELL
EAAVDGPLPPTKVVVVDEYHDAYPLLAQVAERWVAAANTAIVAGDPLQVVNAYAGADPRF
FTDRMDHLPEVLLDKSWRVAEEHWQVATRMLQREFEAPPIDRHGRGEIHEYQSPEFTHAQ
NAGWTVPGANQPASPVALADEYVAGNDNRDMLLLARTQKQAQGVSAALDKGGVVHETQDA
DDVGGWTQRRVDALNAVLKLQTVPGSYGQDTNQYGLMKYDGDAADFRLDAEEAAVILEHA
HGRTLEHTSDELDSFVESLRSDSENSDNGQTLSADDLDKVVKPAFWRKYTDGPATVRRLT
KAGEFEDEDLKALQKAAVRYDDPVPGDVLKKVRVLTIHASKGSEATDVVIYDGITSTIGT
EMERSRSTRENEARTWYVGLTRASERLHIMREGFSWVQPHLPRDIAPVAAVAAERAVEDE
SARSEGGEA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcccggggagcccacagactacgacgcggcaacagactacgaggacgccgccccaccg
gaagcggtccgttcaggactgccggaagaactcaaagacgcgcaaatcaagggtggggaa
acctacccggtcaccgatagcattcgtctcaacggcccgccgggggttgggaagaccaca
caggtgtgcctacgcgtttcgacgctcatcactgagtacgacatcgacccgtcggacgtc
acgatcgtgacgtaccgccggtcgctcgcagacgaaatcggtgaccggctcaagtcgtgg
ggtgtcatcgacgacgatgccgacctatcgatgtggacgacagcgcacgcctgtgcgaac
cgagtaacagggttattatcgcgtgataagggtagtgcgaacgactatcagcagaacagt
ggtcggggactcggccctgcagtgactacatacgaacagtcgtacttctgcagtgatgtt
ctgaatatccggtactggtctggtcagccgtgggaatcgacgcgcgggcagttgctgttc
gacgtattcgagtatgcagcgaataatcttctagacccacgtgacgagggtgatctgcgc
gaaattccggcatatgacgatcttcgtgaggagtggccgggagtggacgtcgccacggtc
tacgagcagtggcagcagttcaaggggcatcaggacttggtggagttccatgaactcctc
gaagccgctgtagacggtccgcttccacccactaaggtggttgtcgtggacgaatatcac
gacgcgtacccgcttctggcccaagttgcagaacggtgggttgcagccgctaacacggcg
atcgtggcaggcgaccccctacaagttgtcaatgcctatgcgggtgctgacccgcggttc
tttaccgaccgtatggaccacttgcctgaggtgctcctcgataagtcgtggcgggtggcg
gaggaacactggcaggtggcgactcggatgctgcagagagagttcgaagcgccaccaatc
gaccgacacggtcgcggagaaatccacgagtaccagtctcccgagttcacccacgcgcag
aacgcggggtggacggttcccggggcgaatcagccggcgagccccgtggcgctcgcagac
gagtacgtcgccgggaacgacaaccgcgacatgttgctcctagcgagaacacagaaacaa
gcgcaaggcgtcagcgcagcgctcgacaaaggcggggtcgttcacgagacccaggacgcc
gacgacgtcggcgggtggacacaacggcgtgtagacgcgctaaacgccgtattgaaactg
cagactgtgccgggaagttacgggcaggacaccaatcagtacggactcatgaagtacgac
ggtgacgcggcagatttccgattagacgctgaggaagcggcagtcatcttagagcatgcg
cacggtaggacacttgaacacacaagtgatgaactcgattcgtttgtggaatccctacgt
agcgactctgagaactctgataacggacagacactgtccgcggatgaccttgataaagtt
gtcaagccagcattctggcgtaagtacacggacggtccggcgacggtgaggcgtctcacg
aaggccggcgagttcgaggatgaggacctgaaagcgctgcagaaagccgctgtaaggtac
gatgacccggttcctggggacgtgttgaagaaggtccgtgttctcacgatccacgcttcg
aagggtagtgaggcgacggatgtcgtgatttatgacgggatcacgtccacgatcggcact
gaaatggagcgctcacgttcgacacgcgagaacgaagcgcggacatggtacgtcgggctg
acgcgcgcgtcagaacgcctccacatcatgcgtgagggcttttcttgggtgcaaccacac
ttaccccgagatattgctccggtcgctgcagtagctgcagagcgcgcggtagaagatgaa
tctgcgcggagcgaaggaggtgaggcgtga
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