Halorubrum ruber: J7656_12860
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Entry
J7656_12860 CDS
T07186
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hss
Halorubrum ruber
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hss03016
]
J7656_12860 (truD)
Enzymes [BR:
hss01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
J7656_12860 (truD)
Transfer RNA biogenesis [BR:
hss03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J7656_12860 (truD)
Prokaryotic type
J7656_12860 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QUO47448
UniProt:
A0A8T8LKL1
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All DBs
Position
2606558..2608015
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AA seq
485 aa
AA seq
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MAVERTLREAHPTEQAVGIDHYVSDADGIGGRLRESPEDFRVRELEAFDAEPLDADPGSY
PELVLRATLRDWDTNDFARRLSDALGISRERVSWAGTKDKRAVTTQLFTVRGVDADELPE
IRGAEIEALGRAGRSLSFGDLAGNAFEIRVTDAVDDAPERVTDAVRDLRAFAGDGEAPPD
GEGDVPIEATVGVPNYFGQQRFGSRRPVTHLVGLAIARRDPREAVRLYAGNPAETEPDDT
RAARDRVDAAFGVGGESGPAADGTGDGDWAACLDAIPGKLRFERSMVHRLADRGVDPAAP
PDDEDWWHALEAVPSNLQRLFVNAAQSSLFNRVVSERLRRGLPFDRPVAGDVVCFADGDA
PEELYAPDTDRLQRVDADRVDVVSRHCERGRAFVTAPLVGTETELGDGEPGEIEREVLAD
AGIEPGDFALPGEFDSKGTRRAILLRTDLDVTFAGGDPCFAFALPSGSYATVLLREFTKS
GPLDL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgaacgcacccttcgcgaggcgcacccgaccgagcaggcggtcggcatcgat
cactacgtgagcgacgccgacgggatcggcggccggctccgcgagtcgcccgaggacttc
cgcgtccgcgagctggaggcgttcgacgcggaaccgctcgacgccgaccccggaagttac
cccgagctcgtcctccgggcgacgctccgcgactgggacacgaacgacttcgcgcgccgg
ctctcggacgcgctcgggatcagccgcgagcgcgtctcgtgggccgggacgaaggacaag
cgcgcggtcaccacccagctgttcacggtccgcggggtcgacgccgacgaactccccgag
atccgcggcgccgagatcgaggcgctcggccgggcggggcggagcctctcgttcggcgac
ctcgcgggcaacgccttcgagatccgggtcacggacgcggtcgacgacgcccccgaacgc
gtcaccgacgcggtgcgggacctccgcgcgttcgcgggcgacggagaggcccctcccgac
ggtgagggcgacgttccgatcgaagcgaccgtcggcgtcccgaactacttcggccagcag
cggttcggcagccggcggccggtgacgcacctcgtggggctcgcgatcgcccggcgcgac
ccccgcgaggcggtccggctgtacgccggcaacccggccgagacggagcccgacgacacc
cgggccgcgcgcgaccgcgtcgacgcggcgttcggcgtcggcggggagtcgggtcccgcc
gccgacggcacgggcgacggcgactgggccgcctgcctcgacgcgatccccggcaagctc
cggttcgagcggtcgatggtccaccggctcgccgaccgcggcgtcgacccggccgcgccg
ccggacgacgaggactggtggcacgccttagaggcggtgccctcgaacctccagcggctg
ttcgtcaacgccgcgcagtcgtccctcttcaaccgggtcgtgagcgagcgactgcgccgc
gggctcccgttcgaccgccccgtcgccggcgatgtggtgtgtttcgccgacggcgacgcg
cccgaggagctgtacgcgccggacacggaccggctccagcgggtcgacgccgaccgggtc
gacgtggtctcccggcactgcgagcgcgggcgggcgttcgtcaccgcgccgctcgtcggc
accgagacggagctcggcgacggcgagccgggcgagatcgagcgggaggtcctcgccgac
gccgggatcgagccgggcgacttcgcgctccccggcgagttcgactccaaggggacgcgg
cgggcgatcctcctccgtaccgacctcgacgtgacgttcgcgggcggcgacccgtgcttc
gcgttcgcgctcccgagcggttcgtacgcgaccgtgctgctccgcgagttcacgaaaagc
ggtccgcttgacctgtga
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