Halorubrum ruber: J7656_13405
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Entry
J7656_13405 CDS
T07186
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hss
Halorubrum ruber
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hss03036
]
J7656_13405 (smc)
Chromosome and associated proteins [BR:
hss03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
J7656_13405 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
ATG16
Crescentin
DUF1664
DUF724
MscS_porin
AAA_13
CENP-F_leu_zip
AAA_21
AAA_29
CCDC113_CCDC96_CC
Fez1
GAS
DUF3450
Tropomyosin
Fib_alpha
TPR_MLP1_2
CCDC22_CC
NPV_P10
Laminin_II
APG6_N
Exonuc_VII_L
DUF4407
FlaC_arch
DUF4200
ATG17_like
ATG14
OVT1
TMPIT
EzrA
Filament
DUF3584
Motif
Other DBs
NCBI-ProteinID:
QUO47551
UniProt:
A0A8T8LM50
LinkDB
All DBs
Position
complement(2711304..2714888)
Genome browser
AA seq
1194 aa
AA seq
DB search
MHITEVVLDGFKSFGRTTRIPFYEDFTVVTGPNGSGKSNIIDGVLFALGLARTRGIRAKK
LTDLIYNPGHDDGEAADGPNEASVTVVLSNEDGTLDRSQVVSAAGTENVGDVSEITIKRR
VKETEDNYYSYYYLNGRSVNLSDVQDLLAAAGVTPEGYNVVMQGDVTEIINMTPYQRRGI
IDEIAGVAEFDEKKEAAYEELDTVEDRIGEADLRIGEKQDRLDQLADERETALEYQELRD
ELEEYRGFRKASELEEKRDALADVEGDIDEAEADLESLREELDARQGKLTRLEEDLADLN
HEIETKGEEEQIQIRSEIEEIKGEVSRLEDKIESAESRAESAENDRRQAFVQIDRKEEKV
EELEAEIRETKVEKASVKSELATKRSELADVEAEIEGADTEFDELKSDLAEKKEAIEALR
EEKNETQREKDRLLDEARRRSNAVSEAREELEEARESLPEHKARISELKSELDKAEKNQA
TIEDAVADLFAEKAEKEERLEEIESTLREKQNEYAKLEAAADERGDASWPRAVTEVKNGG
IDGVHGAVGELGSVEAEYAEACETAAGGRLANVVVDDDGVGSTCIDYLKQRNAGRATFLP
ITKMDDRSLPRKPSLPGVVDFARNLVEYDAEYESIFSYVLGSTLVVEDMSTARELMGDYR
MVTLDGDLVEKSGAMTGGSGGGSRYSFTKSGGGKLERLATEISDLEDERQSVQSEIDALD
DDIEDARDRKADAAERVRSLEADVERAEDDLAEAEARIEELEDELEELEAERESVDEQMT
ALDEEIAATDAEIDELAAEIDDIEAELADSKIPELSERADEIRSEIGDLEERMDSFDSRI
NELELEKGYAEDALDDLHDDVEEAQNAKAEAEEAIAEHEAAIEEKEAELAEKKEAIADLE
EELTELKEQREELREEIREATRKRDEQRSLVSEAESDLSDLTDRRDRLEWEIDELESQVG
AYDADEIPDLDEVESRIEALESEMEALEPVNMLAIDEYEEVQEALDELQERRDVLVEERD
AIEERIEGYEAAKKETFMETFESINDHFEDIFARLSAGSGELVLENPEDPFEEGLTMKAQ
PADKPVQRLDAMSGGEKSLTALSFIFAVQRHNPAPFYALDEIDAFLDAVNAERVGEMIEE
LAEEAQFVVVGHRSALLERSDRAIGVTMQGDNLSAVTGMQFGDDADEEEVTADD
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcactgaagtggtcttagacgggttcaagagcttcgggcgaacgacgaggatc
cccttctacgaggacttcaccgtcgtcaccggcccgaacggctccgggaagtcgaacatc
atcgacggcgtgttgttcgcgctcgggctcgcccgcacccgcgggatccgcgccaagaag
ctcaccgacctcatctacaaccccggccacgacgacggcgaggccgccgacgggccgaac
gaggcgtccgtcacggtcgtactctccaacgaggacggcaccctcgaccggtcgcaggtc
gtctccgcggccggcacggagaacgtcggcgacgtctccgagatcacgatcaagcgccgc
gtgaaggagaccgaggacaactactactcgtactactacctcaacggacgctcggtgaac
ctctcggacgtccaggacctgctcgcggcggcgggcgtcacgccggaggggtacaacgtg
gtgatgcagggcgacgtcaccgagatcatcaacatgaccccctaccagcggcgggggatc
atcgacgagatcgcgggcgtcgcggagttcgacgagaagaaggaggccgcctacgaggag
ctcgacacggtcgaagaccggatcggcgaggccgacctccgcatcggcgagaagcaggac
cgcctcgaccagctcgccgacgagcgcgagaccgccctcgagtaccaggagctccgcgac
gagctcgaggagtaccgcgggttccggaaggcctccgagttagaggagaagcgcgacgca
ctcgcggacgtcgagggcgacatcgacgaggccgaggcggacctcgaatcgctccgcgag
gagctcgacgccagacaggggaagctcactcgcttggaggaggacttagcggacctcaac
cacgagatcgagacgaaaggcgaggaggaacagatccagatccgctcggagatagaggag
atcaaaggcgaggtctcgcggttagaggacaaaattgagtccgccgagtcgcgcgccgaa
tcggccgagaacgaccggcggcaggcgttcgtccagatcgatcgcaaagaggagaaggtc
gaggagctggaggccgagatccgcgagacgaaagtggagaaggcgtcggtgaagtcggag
ctggcgacgaagcgctccgagctggccgatgtcgaggccgagatcgagggcgcggacacg
gagttcgacgagctgaaaagcgacctcgcggagaagaaggaggcgatcgaggcgctccgc
gaggagaaaaacgagacgcaacgcgagaaggaccggctgctcgacgaggcccgccgccgc
tcgaacgccgtgagcgaggcccgcgaggagttagaggaggcccgcgagtcgctcccggaa
cacaaggcgcgcatctccgagctgaaaagcgagctcgacaaggcggagaagaaccaggcg
accatcgaggacgcggtcgccgacctgttcgcggagaaggccgagaaggaggagcgctta
gaggagatcgagtcgacgctccgcgagaagcagaacgagtacgccaagctggaggcggcg
gccgacgagcgcggcgacgcctcctggccccgcgcggtcaccgaggtgaagaacggcggt
atcgacggcgtccacggcgcggtcggcgagctgggctcggttgaggccgagtacgccgag
gcctgcgagaccgccgcgggcggccggctggcgaacgtcgtcgtcgacgacgacggcgtc
ggctcgacctgtatcgactacctgaaacagcgcaacgcgggccgggcgacgttcctcccc
atcacgaagatggacgaccggagcctgccgcggaagccctcgctgccgggcgtggtcgac
ttcgcgcgcaacctcgtcgagtacgacgccgagtacgagtcgatcttctcgtacgtcctc
ggctcgacgctcgtcgtcgaggacatgtcgaccgcgcgcgagctgatgggcgactaccga
atggtgacgctcgacggcgacctcgtcgagaagtcgggcgcgatgaccggcggctccggc
ggcggctcccgctactcctttacgaagtccggcggcggcaaactggagcggctcgcgacg
gagatctccgacctcgaggacgagcggcagtcggtccagtcggagatcgacgcgctcgac
gacgacatcgaggacgcgcgcgaccggaaggccgacgcggccgagcgcgtccggtcgctg
gaggctgacgtcgagcgcgccgaggacgacctcgcggaggccgaagcccggatcgaggag
ctggaagacgagctggaggagctggaggcggaacgcgagtccgtcgacgagcagatgacg
gcgctcgacgaggagatcgcggcgaccgacgcggagatcgacgagctcgcggccgaaatc
gacgacatcgaagccgagttggccgactcgaagatcccggagctctccgagcgcgccgac
gagatccggtctgagatcggcgacctcgaagagcggatggactcgttcgacagccggatc
aacgagctggagttggagaaggggtacgccgaggacgcgctcgacgacctccacgacgac
gtcgaggaggcgcagaacgcgaaggcggaggccgaggaggcgatcgccgagcacgaagcc
gcgatcgaggagaaggaggcggaactcgccgagaagaaggaggcgatcgccgatctcgag
gaagagctcacggagctgaaagagcaacgcgaggagctccgcgaggagatccgcgaggcg
acccggaagcgcgacgagcagcggtcgctcgtctcggaggccgagtcggacctctcggac
ctcaccgaccgccgcgaccggctggagtgggagatcgacgagctggagtcgcaggtcggc
gcctacgacgccgacgagatccccgacctcgacgaggtggagtcgcggatcgaggcgctc
gaatcggagatggaggcgctcgaaccggtgaacatgctcgccatcgacgagtacgaggag
gtccaggaggcgctcgacgagctccaagagcgccgcgacgtgctcgtcgaggagcgcgac
gccatcgaggagcgcatcgaggggtacgaggcggcgaagaaggagacgttcatggagacg
ttcgagtcgatcaacgaccacttcgaggacatcttcgcgcgcctctcggcgggatccggt
gaactcgtcttggagaaccccgaggaccccttcgaggagggattgacgatgaaggcccag
cccgcggacaagccggtccagcgcctcgacgcgatgagcggcggcgagaagtcgctcacc
gccctctccttcatcttcgccgtccagcgccacaacccggcgccgttctacgcgctcgac
gagatcgacgcgttcctcgacgcggtcaacgccgagcgcgtcggcgagatgatcgaggag
ttagccgaggaggctcagttcgtcgtcgtcggccaccgctcggcgctgctggagcgctcc
gaccgcgccatcggcgtcacgatgcagggcgacaacctctcggcggtgaccggcatgcag
ttcggcgacgacgccgacgaggaggaggtgaccgcggatgactga
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