KEGG   Halorubrum ruber: J7656_14775
Entry
J7656_14775       CDS       T07186                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hss  Halorubrum ruber
Brite
KEGG Orthology (KO) [BR:hss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hss03400]
    J7656_14775
Enzymes [BR:hss01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J7656_14775
    5.6.2.6  RNA 3'-5' helicase
     J7656_14775
DNA repair and recombination proteins [BR:hss03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J7656_14775
SSDB
Motif
Pfam: DEAD DEAD_assoc Helicase_C WH_Lhr ResIII AAA_25 PqqD AAA_19 DEXQc_Suv3 HypA
Other DBs
NCBI-ProteinID: QUO47792
UniProt: A0A8T8LKL5
LinkDB
Position
2998612..3001560
AA seq 982 aa
MAEPSGMDAFAHLGSEIREALSDRGFTTPTEPQREAIPPLADGKNALVLAPTGTGKTETA
MLPVFDAIVDARDSPGDPPRDGISALYITPLRALNRDMMDRLEWWGETLSVEVAVRHGDT
TQYERSKQADNPPDVLITTPESLQAILTGSKMRVALEDVAHVVIDEVHELASAKRGAQLT
IGLERLRRVAGPFQRVGLSATVGDPEEVGRFLVGTGKRDPEREGDRTFETVEVAAGTRTD
VRVRDPEITDRDTRLAGELAVDETTASHVRTIREIVADNESTLIFVNTRQTAEALGSRFK
TLAEKEREAADRTDGTDDPTEIELHHGSLSKDVRIDVEDRFKSGDLDGLVCTSSMELGID
VGRVDHVVQYGSPREVARLLQRVGRAGHRRDLVSEGTVVTQGGDDTLEALAIARRAGEEL
VEPANIHHGSLDTVANQVVGLVMDEGEIHAREAYETVTNAYPFRDLSEPEFQEVVRELDG
NRLLWLDEETDTLEKSGGTWQYFYANLSMIPDEATYEVYDMSSRRQIGTLDEQFVVNFAG
PGETFVQRGEMWRITEIDEEEERVNVTPIPDPTGEVPSWVGQEIPVPKPVAEEVGRIRGE
AAAALDAGSTPEAVAADLAERYPTDQETVAAALKSVVDHVDAGHPIPTDERIVIEGSART
VAVNAAFGHEVNETLARLLAALVGQRAGSSVGMDVDPYRIEFEVPHDAGVGDFREVLETT
DPDRLEAYLELAVKKSDALKFTLAQVAAKFGAVKRYKEGRGKFGGDRLLAALEDTPVYDE
ALREVFHADLAVPETADLLAGIQAEADAAGGSVAVETARERTPLGTAGRSAGTEFLVPDN
ADADVIETVRERIQDDRVILFCLHCTDWKHTTKVRRVRDQPECPDCGSTRIAALNPWDEE
TVAAVRAPEKDDEQERRTERAHRAASLVQTHGKRAVIALAARGVGPHNAARIINKLREDE
DEFYRDVLRQEREYARTQSFWD
NT seq 2949 nt   +upstreamnt  +downstreamnt
atggcggaaccgtcgggcatggacgcgttcgcgcacctcgggagcgagatccgcgaggcg
ctctccgaccgagggttcaccacgccaaccgagccccagcgcgaggcgatccccccgctc
gccgacgggaagaacgccctcgtcttggcccccactggcaccgggaagacggagaccgcg
atgctccccgtcttcgacgccatcgtcgacgcccgcgattcgccgggcgacccgccgcga
gacggcatctccgcgctctacatcacccccctccgcgcgctcaatcgcgacatgatggac
cggctggagtggtggggcgagaccctcagcgtcgaggtcgcggtgcgtcacggcgacacc
acccagtacgagcggtcgaagcaggccgacaacccgcccgacgtgctcatcacgacgccg
gagagcctccaagcaatcttgaccggctcgaagatgcgcgtcgccctcgaagacgtcgcg
cacgtcgtgatagacgaggtccacgaactcgcctcggcgaagcgcggcgcccagctcacg
atagggctcgaacgcctccggcgcgtcgcgggcccgttccagcgcgtcggcctctccgcg
acggtcggcgaccccgaggaggtcggacggttcctcgtcgggaccggaaaacgcgacccg
gaacgcgagggcgaccgcacgttcgagacggtcgaggtcgcggccgggactcggacggac
gtacgcgtccgcgacccggaaatcaccgaccgcgacacccgcctcgcgggcgaactcgcg
gtcgacgagacgacggcgagccacgtccggacgatccgcgagatcgtcgcggacaacgag
tcgacgctgatcttcgtcaacacgcgccagaccgcggaggcgctcggctcgcggttcaag
acgctcgcggagaaggagcgcgaggcggcggacagaaccgacggaaccgacgaccccacc
gagatcgagctccaccacggctcgctgtcgaaggacgtccggatcgacgtggaagaccgg
ttcaagtccggcgacctcgacgggctcgtctgcacctcctcgatggagctcggcatcgac
gtggggcgcgtcgaccacgtcgtccagtacgggagcccccgcgaggtcgcccgcctgctc
cagcgcgtcgggcgcgcgggccaccgccgcgacctcgtctccgaggggaccgtcgtgacg
cagggcggcgacgacacgctcgaagcgcttgccatcgcgcgccgcgccggcgaggagctg
gtcgagcccgcgaacatccaccacggcagcctcgacacggtcgcgaaccaggtcgtcggc
ctcgtgatggacgagggggagatacacgcccgcgaggcgtacgagacggtcacgaacgcc
tacccgttcagggacctctccgagccggagttccaggaggtcgtccgcgagctcgacggc
aaccgcctgctgtggctcgacgaggagacggacaccttagagaagtcgggcggcacctgg
cagtacttctacgcgaacctgtcgatgatccccgacgaggccacctacgaggtgtacgac
atgtcctcgcggcggcagattgggaccctcgacgagcagttcgtcgtcaacttcgccggg
ccgggcgagacgttcgtccagcgcggcgagatgtggcggattacggagatcgacgaggag
gaggagcgcgtgaacgtgacgccgatccccgacccgaccggcgaggtgccctcgtgggtg
ggccaggagatcccggtcccgaagcccgtcgcggaggaggtcggccggatccgcggggag
gcggcggccgcgctcgacgccggttcaacgcccgaagccgtcgcggccgacctcgcagag
cggtacccgaccgaccaagagacagtcgcggccgcgctgaaatcggtcgtcgaccacgtc
gacgccggccacccgatccccacggacgagcggatcgtgatcgaggggagcgcgcgcacc
gtcgcggtcaacgccgccttcggtcacgaggtcaacgagaccctcgcgcgcctgctcgcg
gcgctcgtcggtcagcgcgccggctcgtcggtcgggatggacgtcgacccctaccggatc
gagttcgaggtcccccacgacgccggcgtcggggacttccgcgaggtgctggagacgacc
gaccccgaccgcttagaggcgtacctcgaactcgcggtcaaaaagtccgacgcgctgaag
ttcacgctggcgcaggtcgccgcgaagttcggcgccgtcaagcggtacaaggaggggcga
gggaagttcggcggcgaccgcctgctcgccgccctcgaggacacccctgtctacgacgag
gcgctccgcgaggtgttccacgccgacctcgcagtcccggagacggccgacctgctcgcg
gggatccaggcggaggccgacgccgcgggcggctccgtcgcggtcgagaccgcccgcgag
cgcaccccgctcgggaccgcgggccgctccgccggcacggagttcctcgtcccggacaac
gccgacgcggacgtgatcgagacggtcagagagcggattcaggacgaccgggtgatcctc
ttctgtctccactgtacggactggaagcacacgacgaaggtccggcgcgtccgcgaccag
ccggagtgtcccgactgcggctccacccggatcgcggcgctgaacccgtgggacgaggag
acggtcgccgcggtgcgcgcgcccgagaaggacgacgaacaggagcgccgcaccgagcgc
gcccaccgcgccgcgagcctcgtccagacgcacgggaagcgggcggtgatcgccctcgcc
gcccgcggcgtcggtccccacaacgccgcgcggatcatcaacaagctccgcgaggacgaa
gacgagttctaccgcgacgtgctccggcaggagcgcgagtacgcgcgcacgcagtcgttc
tgggattag

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