Harpegnathos saltator (Jerdon's jumping ant): 105180742
Help
Entry
105180742 CDS
T03918
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105180742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105180742
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105180742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
105180742
NCBI-ProteinID:
XP_011135306
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MADDNEDQWLYGDSVEGKEYTSTNTQSEIHQNDSASVKLQEKSQISEDQKVENVNENPPE
MQEDTSGGGEESLLNNLQEENTDANKNGTKEASSQEDGEAPSDSDSDDDVHVVIGDIKST
PAYGSLNIKRGGLLTNASGVPDKLNKQPGKFSIEEFETIGIINGIPAHEFNLDQLEDKPW
RQPGADITDYFNYGFNEETWRAYCERQKRMRNESGVGLILNTGSGGGNQGSMRMPQVAIT
NDNSKYSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADRRE
YSRKPGFPDMSVPPPGAGMPPPFDIPPPGYAGEPTSFYMPDADPYYQSYEPTQDSQWGND
PVRKLRSRNVSEKTWQPTNLAIPMTEHEDDKDIGPKTIPTMVPPTSIPPLIQSRDQRDGR
DRERDRDRERDREMDSMGRDRDRDKDRERDREREKDPIIRDRDRERESMTRDEDRERDRS
RSQYRHKDRHRHRSRSRSRRHKSRSRSPSRRKKKSRRSDRERSKEESE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgataacgaagatcagtggttgtatggcgattcagttgagggaaaggagtat
acgtcaacaaatactcaatcggaaattcatcagaatgattcggcttctgttaaacttcaa
gagaaatctcaaatttcggaggatcaaaaagtggagaatgttaatgagaacccacctgag
atgcaggaggacacaagcggtggcggagaagaatctttgctgaacaacctacaggaagag
aacacggatgcaaataagaatggaacaaaagaagcatctagccaggaagatggcgaggca
cctagcgactctgattccgacgatgatgtccatgttgttattggtgatatcaagtctact
ccagcgtatggtagcttaaacatcaagagaggcggattgttgaccaatgcatctggtgtg
ccagacaaattgaataaacaaccgggaaaattcagcatagaagagtttgaaacgattggt
attatcaatggaataccagctcatgaatttaatctagatcagttagaggataaaccatgg
cggcaacctggtgcggacatcacagattacttcaattatggtttcaatgaggagacctgg
cgtgcctattgtgaacgacagaagcggatgcggaatgagtctggagtgggattgatactg
aacactggtagtggcggcggtaatcagggtagcatgagaatgcctcaggttgcgataact
aacgataatagcaagtactcagggatcatgggtcctaagagagcaggaccgccgccagga
cggaaaatggctggtactattgatgttattggtagttctggactagcctcgaggagaaat
ctggacaaatcgccaccgaaagggaatgttatacaagtaatgaccgcggacaggagggaa
tactcgagaaaacccggtttccctgatatgagcgtgccaccacccggtgcgggtatgcca
ccgccattcgacataccgccgccggggtacgccggtgaacccacgtctttctatatgcca
gacgcagacccatattatcagagttatgaaccgacacaggacagtcaatggggcaacgat
ccggtaaggaaattgcgttcacgcaatgtatctgaaaagacgtggcaaccgactaacctt
gctatcccgatgaccgaacacgaggacgacaaggacattggacctaagacgatacccact
atggtgccaccgacgtcaattccgcctctgatacagtcccgtgatcagagggacggtagg
gatcgtgaacgagacagagacagagagcgcgacagggagatggattccatgggcagagac
agggatagggataaagacagggaacgcgatcgtgagagggaaaaagatccgataataagg
gaccgtgacagagagagggaatcgatgacgagagacgaggatcgagagcgcgacagatcc
agatctcagtaccggcacaaggataggcatcggcatcggtcaagatctcgatctcgcagg
cacaaatcgagatcacgtagtccgagtaggcgtaagaagaaatccagacgttcggacaga
gagcgctccaaggaagaaagtgaataa
DBGET
integrated database retrieval system
