Harpegnathos saltator (Jerdon's jumping ant): 105181480
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Entry
105181480 CDS
T03918
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105181480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hst03400
]
105181480
Enzymes [BR:
hst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105181480
DNA repair and recombination proteins [BR:
hst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
105181480
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
105181480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH
Cdd1
IMS_HHH_1
IMS_HHH
DUF4332
HHH_2
5_3_exonuc
V-SNARE_C
Motif
Other DBs
NCBI-GeneID:
105181480
NCBI-ProteinID:
XP_011136568
UniProt:
E2BD47
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MSKRKISYEPAYDRPNQDIYDFLMELAFYELYNNKIYKFNNYRNAAEMLSALPGRIKNAY
EAMKLPGIGKKIADHINEFLETGTHKELQQVKKDDKQDAIILLMKIPGIGPAKAEQLISA
GIETLEDLKQHEDKLNRQQRIELKYFDDFEKKITRDEIMRIENLFKDAIEELDNKYLVTF
CGSYRRGLEDNEPIIAVVTHPDYKSNIKKKDTEITMKAILECLEDKNLIRETISLGAITF
MGACRLPRRKKGPFRRLNIQLVFYDHYYCAALYYTGSEIFNKVIRAHALEKKYILNKHTL
KSVTTGKIEEITSEKSIFDILGLSYEFPQWRNA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaggaagatttcatatgaaccggcatatgatcgcccaaatcaggatatttac
gattttctgatggaattggcattctacgagctttataataataaaatttataaatttaac
aactaccgcaatgctgctgaaatgttaagtgctttgccaggaaggataaaaaatgcgtat
gaggcaatgaaattacctggtataggaaaaaaaattgcagaccatataaatgagtttctt
gagacaggaacacataaagaattgcaacaagtcaaaaaagatgacaagcaagatgctatt
atcttgttaatgaaaatacctggtataggtcctgcaaaggcagaacaattaataagcgct
ggtattgaaacattggaagaccttaagcagcatgaagacaaacttaacagacaacaaaga
atagaattaaagtactttgatgattttgagaagaaaataactagagatgagatcatgaga
atagaaaatttatttaaagatgctatcgaggagttagacaacaagtatcttgtaaccttt
tgtggaagctataggcgtggcttggaggataatgaacctatcattgctgttgtaacacat
cctgattacaagtcaaatattaaaaagaaggacacagaaataaccatgaaagcaattctt
gaatgtcttgaagataaaaatctaatcagagaaacaatatcccttggagctatcacattt
atgggtgcatgtcgattacctagacgtaagaaaggacctttcagaaggctgaatatacaa
cttgtattttatgatcattattattgtgctgcactttattatacgggaagtgaaatattt
aataaggttattagagcacatgcattggaaaagaaatatatcctcaataaacatacattg
aaatctgtaactacaggtaaaatcgaggaaatcacaagcgaaaagagtatttttgacatt
ttgggtttgtcatatgagtttccacaatggagaaatgcataa
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