Harpegnathos saltator (Jerdon's jumping ant): 105182210
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Entry
105182210 CDS
T03918
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105182210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105182210
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105182210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105182210
NCBI-ProteinID:
XP_011137773
UniProt:
E2BFG5
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MDIQYKTIHPVKHLQDHFVQDIRPDGRKFLSFRPISINVSSIVQADSSAIFKLGSTTVVC
GIKAELAIPKTDTPECGYIIPNVELSPLCSPKFRPGPPSEQAQVISKLIDIILKNSTAID
LKDLCICKRKLVWVLYCDMLCLNYNGSVIDACTGALTAALKTLTLPEVNYNLETGVTVVH
PKKRKPFVMKMLPVSISFAIFEKQMLIVDPTDEEESLSLGRLSVVMDSEEEICYVHKPGG
IPISQHLFSKAVEIAKTRADLVRSLIHAAISTLKVETNI
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggatattcaatataaaacaattcatcctgtgaaacacttgcaggatcattttgtgcaa
gatattcgaccagatggtaggaaattcctgtcctttcgaccaataagtattaatgtttca
tcaattgttcaggcagatagttcagcaatattcaaattgggtagtacaactgtggtttgt
ggtattaaagcggaattagcaataccaaaaacagatactccagaatgtggctatataata
ccaaatgttgagttatctccactatgttctccaaagtttcgtccaggtccaccaagtgag
caagcacaggtgatttctaaactaatagatataatattaaaaaattccactgcaattgat
ttaaaggacctttgcatctgtaaaagaaaattggtatgggttttatattgcgacatgcta
tgtttaaattataatggctcagtcatagatgcttgcacaggtgcattgactgcagctctc
aaaacattaactctacctgaagtaaattataatttagaaacaggagtcactgttgtgcat
ccaaaaaagagaaagccatttgttatgaaaatgttgccagtatccatatcatttgcaata
tttgagaaacaaatgttaattgttgatcctacggatgaagaggaaagtttatcattagga
agattatctgttgtgatggatagtgaagaagaaatttgttatgtgcataaaccaggtggt
attccaatatcacaacatttattttccaaggcagtagaaatagcaaaaaccagagcagat
ctagttcgatcattgattcatgctgctatttcaacattgaaagttgaaacaaatatttga
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