Harpegnathos saltator (Jerdon's jumping ant): 105182392
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Entry
105182392 CDS
T03918
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X2
KO
K14328
regulator of nonsense transcripts 3
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03013
Nucleocytoplasmic transport
hst03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105182392
03015 mRNA surveillance pathway
105182392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105182392
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105182392
mRNA cycle factors
P-body specific factors
105182392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
105182392
NCBI-ProteinID:
XP_011138079
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MTEETQQSEVAAENDVGAVQNDTQTNLSDVGKVRDNKKEKCRPMTKVVIRRLPPTMTQEQ
FLEQISPLPEHDYFYFVKADMSLGQFAFSRAYINFTDQQDIFVFREKFDNYVFIDAKGVE
YPAVVEFAPFQRLARKRHGRKKDLKCGTIESDSYYISFLESLKNQEIDSNVAQSKTEYSY
QPPDNTTKKVTTTPLLEYLKQRKQEKQRLRDEKREERRRRDLERRRTKDDPIISKQTYNT
EVNRSSKFMVLRSAKIQLEELLLPKFVENVLKNPDLDRESSKDDKENKDERDKLSPKDLK
NRTKRDDKVREKSSRDRETKPILKGYRDERNKDRDLKQRRYDEKKLYGRRDDREGVKEDK
RIDLRDERKYEAKEDRKVEEKRGKSYEKMRQEKKKLAETKKQMADANVSEASPKKTREEH
DSVQEVEDVTGGNVRESARDDEDSKHARDNERVQRNATEDRVTGEDAPEDRRDIAERGNS
VDNADANEDDGSESKMESKVVKRRSSLESGGEGGTGDGNCLRRHKSLDGGGQSNLQKNES
EEKEKDKKDPRLERRIRNKDRPAMEIYRPGMGKFSKQRLEREKSNNDERASLSQSPTPNP
GASTSGKSGKSATEVRSMTFKRSVSRDVA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggaaacacaacaatccgaggttgctgcggaaaatgacgttggtgctgtacag
aatgatacgcagacgaatttatcggatgtcggaaaagtccgagacaacaaaaaagaaaaa
tgtcgtcccatgacgaaggtggtaattagacgactgcctccaacaatgacacaggaacaa
tttttagaacagatctctccacttccggaacatgattacttttactttgtgaaagctgac
atgtctcttggtcaatttgcattttcccgtgcttacatcaatttcacagaccaacaagac
atatttgtgtttcgagaaaaattcgacaattatgtcttcatagatgccaaaggtgtggaa
tatcctgcagtagttgaatttgcacccttccaaagattagcgaggaaacgacatggcagg
aagaaggatctcaagtgcggcactatcgagagcgattcgtactacataagttttctagag
agcttaaagaaccaggaaatcgactcgaatgtagcacaatcaaagaccgaatattcttac
caaccaccagataatacaacaaagaaagttacaacaactccactactcgaatatctgaag
cagcgcaagcaagagaagcagcgtctcagagatgaaaagcgcgaagaaaggcgcaggaga
gatctggagagacggagaacgaaagatgaccctattatttctaagcaaacatacaacaca
gaagtcaataggtcatccaagttcatggtattacgctccgcgaaaattcaattagaagag
ttgttgcttccaaagtttgtcgaaaatgttctaaagaatccggacctggacagagagtcc
agtaaagacgacaaagaaaacaaggacgagagggacaagctttcgccgaaggacttgaag
aaccgaaccaaaagagacgacaaggtgcgggaaaagtcgtcgcgagatcgagagaccaag
cccatcctcaagggttacagggacgagaggaacaaagatcgcgacctcaagcaaagacga
tacgacgagaagaagctgtacgggcgacgtgacgacagggagggcgtgaaggaggacaaa
aggatcgacctgagggacgagcggaagtacgaggcgaaggaggacagaaaggtggaggag
aaacgcggcaagagttacgagaagatgaggcaggagaagaagaagttggcggaaacgaag
aaacagatggctgacgccaacgtgagcgaagccagtccgaaaaagacgagggaggaacac
gatagtgtgcaggaggttgaggacgttaccggcggtaacgtccgggaatccgcgcgcgac
gacgaggattccaagcatgcccgagacaacgaacgtgtgcagcgtaacgccaccgaggat
agagtgacgggcgaagacgcgccggaagatcgtcgggatatcgcggagcgaggaaacagt
gtcgacaacgcagatgcgaacgaggacgacggatccgagtcgaagatggagtcgaaggtt
gtgaagagacggagctcgctcgaaagcggcggcgaaggcggcaccggagacggtaactgc
ttaagacgtcataaatcgttagacggaggtggccaaagcaatctgcagaagaacgagagc
gaagagaaagaaaaggataagaaggatccgcgattagagcgtaggataaggaataaggac
cgtccggcgatggagatctaccgacccggcatgggcaagttcagcaaacagaggctggag
cgtgagaagtccaacaacgacgaacgagcgtccctctcgcagagtcctacgccgaatcct
ggagcgtccacgagcgggaaatccggaaagtccgcgacagaagtgcgctcgatgaccttc
aaacgcagcgtcagccgagacgtggcgtaa
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