Harpegnathos saltator (Jerdon's jumping ant): 105183289
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Entry
105183289 CDS
T03918
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105183289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105183289
Enzymes [BR:
hst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
105183289
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105183289
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105183289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
105183289
NCBI-ProteinID:
XP_025152443
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MCYNVLCDKYATRQMYGYCPSWALDWEYRKKGILDEIRHYAADIISLQEVETDQFYNFFL
PELKHDGYDGIFSPKSRAKTMAENDRKYVDGCAIFYRTAKFTLIKEHLVEFNQLAMANAE
GSDNMLNRVMPKDNIGLAALLRTKDAAWDNGVPSDPAQVQQPILVCTAHIHWDPEYCDVK
LIQTMMLSNELRSILDQAGQSFRPGHKPDSSNVQLLLCGDFNSLPDSGVIEFLTSGRVAA
DHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTFEFKGIIDYIFYS
KQSMVPLGLLGPLSQEWFREHKVVGCPHPHVPSDHFPLLVELEMTPTVGTSNGLISRR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtgctacaacgtgttgtgcgacaagtacgccacgcgacagatgtacggctactgtccg
agctgggcgttggactgggagtaccggaagaagggtattctggatgaaatacgccactat
gcggcagacatcatcagcctgcaggaggtcgagacggaccaattctacaacttcttcctg
ccagagctcaagcacgacggctacgacggcatattctcgcccaagtcccgggcgaagacg
atggcggagaacgaccgcaaatacgtcgacggctgcgctattttttataggaccgccaaa
ttcaccctgattaaggagcatttagtcgaattcaaccaattggcaatggcgaacgcggag
ggttcggacaacatgctgaatcgtgttatgcccaaagacaacatcgggctggctgcgtta
cttaggactaaggatgccgcttgggacaatggtgttccatctgatccagcacaggtacaa
caaccgattttagtttgcacggcacacatccattgggatcccgagtactgcgacgtaaaa
ctgatacaaacgatgatgctgagcaatgaattacgttccattttggaccaagctggccag
tcgttccgacctggccacaagcctgactcttccaacgttcaactgttgctttgcggcgac
ttcaattccttacctgattccggagtgattgaatttcttacgtccggtcgtgtagcggcg
gatcatcgtgattttaaggacttagcatacaaatcgtgtttacaaaagatctctggctgc
gacaaacctaacgaatttacgcactccttcaagcttgcatctgcctatagcgaagacatc
atgccctataccaattatacatttgaattcaaaggcataatagattacattttctactcg
aaacaaagcatggtaccgctgggactcttaggtccgcttagccaagagtggtttagagag
cacaaggttgtaggatgtccccatcctcatgtaccatctgatcactttcctctgttagtg
gaactagagatgacaccaacggtaggaacaagcaatggtttgatctcacgcaggtag
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