Harpegnathos saltator (Jerdon's jumping ant): 105184459
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Entry
105184459 CDS
T03918
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105184459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hst03041
]
105184459
Enzymes [BR:
hst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105184459
Spliceosome [BR:
hst03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105184459
Complex B
105184459
Complex C
U2 SnRNP specific factors
105184459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
MscL
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105184459
NCBI-ProteinID:
XP_011141579
UniProt:
E2BME0
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MSYHRGGGNKPKGFGFAGFQMAGTKRSGTNIPPPPPNSALSKQGYHTMSAITENALSASW
GMPKKRSKTEEEYFEDDDELPTSSLEYIPAPGSPTYDLMKKTATKSESDSEEDPLDAFMA
GIDAEVKRNNSLAQCDVDRKEDKSKGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQE
IDYDEDGNPIAPLKKKEIDPLPPIGHSKIDYESFEKNFYNVHEEIANLNKQQVDNLRKTL
GIKVSGPSPPNPVTSFGHFGFDDALMKAIRKNEFTQPTPIQAQAVPAALNGRDIIGIAKT
GSGKTAAFIWPMLVHIMDQRELKAGDGPIGLILAPTRELSQQIYQEAKKFGKVYNIQVCC
CYGGGSKWEQSKALESGAEIVVATPGRMIDLVKMKATNLIRVTFLVLDEADRMFDMGFEP
QVRSICNHVRPDRQTLLFSATFKKRVEKLARDVLMDPVRIVQGDVGEANTDVTQHVIMFH
NPGGKWNWLLQNLVEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIERNK
VITAFKKKDVSTLVATDVAARGLDIPHIKTVINYDVARDIDTHTHRIGRTGRAGEKGTAY
TLVTEKDKEFSGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSINVGGAGLG
FRGRPDSSGLSGSSSQTSKDISDVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRASSDHT
WEQTITPPSVIMPPPPTIPPPKSIPQDNQTCNSVGIEKSERKRVRKSRWE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcatagaggtggtggtaacaagccaaaaggatttggttttgctggttttcaa
atggctggaacaaaaagaagtggtactaatatacctcctccaccaccaaattctgcttta
agtaaacaaggttatcatacaatgtctgctattacggaaaatgctttatctgcttcctgg
ggcatgcctaagaaacgtagcaaaacagaagaagaatattttgaggatgacgatgaactt
ccaacttcttcattagaatatataccagcacctggttctcctacatatgatttgatgaag
aaaacagcaacaaaaagtgaaagtgacagtgaagaggatcccttagatgcttttatggca
ggtatcgatgctgaagtaaaacgaaataattctttggctcaatgtgatgttgatcgcaaa
gaagataaatctaaaggatttagggcagatattgatggagaagatgatgaagaaagttat
tatagatatatggaagaaaatccaactgctggtttgcaacaagaagaatctgatcaagaa
attgattatgacgaagatggtaatcctattgctccactgaagaagaaggaaatcgatcca
ttacctccaattggtcatagcaaaatagattatgaatcatttgagaagaatttttacaat
gtacatgaagaaattgcaaatttaaacaagcagcaagttgacaatttaagaaaaacttta
ggtataaaagtatctggaccatcaccaccaaatccagttactagctttggacatttcgga
ttcgacgatgcgctaatgaaagctattcgtaaaaatgagtttactcaaccaacgcctatt
caagcacaagcagtaccggctgctttaaatggacgagatataataggtatagcaaaaaca
ggtagtggtaaaacagccgcatttatttggccaatgttagtgcatatcatggatcaacgt
gaattgaaagctggtgatgggcctattggtctcattctggcgccaaccagagaattatcc
caacagatctatcaagaagcaaagaaatttgggaaggtttataatattcaagtatgttgt
tgttacggaggtggcagcaaatgggagcaaagcaaagcattagagagtggtgcagaaatt
gtagttgctactcctggtagaatgattgatttagttaagatgaaagcaacaaatttaatt
agagttacatttttggttctagatgaagctgacagaatgtttgatatgggatttgaaccg
caagtacgatctatatgcaatcatgtgagacccgacagacaaacgttattatttagcgcg
acatttaaaaaaagggttgaaaagttagctagggatgttttaatggatcctgttagaata
gtgcaaggagacgttggtgaagctaatactgacgtgacgcaacacgtaattatgtttcac
aatcctggtggtaaatggaactggttgctgcagaacttggttgaatttttaagtgctggc
agtctcttaattttcgttaccaagaagctgaatgcagaagaacttgcgaacaacttgaaa
ctaaaagaatttgatgtattacttctacatggtgatatggatcaaattgaaagaaataaa
gtgattacagcttttaagaagaaggatgtcagtactttagttgctactgacgttgctgca
cgaggtttggacattccacatattaagactgtcatcaattatgatgtagcacgagatatc
gatacacatacgcacagaataggaagaacaggtcgtgcaggtgagaagggtacagcatat
acccttgtaacggaaaaggataaggagttctccggacatttagtaagaaatttagaagga
gcaaaccaagaagtaccaaaaagtttaatggacttggccatgcaaagtgcatggttcagg
aaatcgagatttaaagggggaaaagggaaaagtataaatgttggtggtgctggacttggt
tttagaggcagacctgattcgtcgggtttgagtggatcatcgtctcaaacatctaaagat
attagcgacgttgtgaagaaactagaaaggcatggaccaggtagcgatagactctctgct
atgaaagctgcttttcgaagtcaatacaattctcaattccgagcatcatcagatcacacg
tgggaacaaacaattactccgccgtcagtaataatgcctccaccgccaactatcccacca
ccaaaatccataccacaagacaaccaaacctgtaattctgtagggatagagaagagtgaa
cgtaagagagtgcgaaagagtcggtgggaatga
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