Harpegnathos saltator (Jerdon's jumping ant): 105185170
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Entry
105185170 CDS
T03918
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03022
Basal transcription factors
hst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105185170
09124 Replication and repair
03420 Nucleotide excision repair
105185170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hst03021
]
105185170
03400 DNA repair and recombination proteins [BR:
hst03400
]
105185170
Transcription machinery [BR:
hst03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105185170
DNA repair and recombination proteins [BR:
hst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105185170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Cys_box
Motif
Other DBs
NCBI-GeneID:
105185170
NCBI-ProteinID:
XP_011142778
UniProt:
E2B4L2
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MSNEINTSLLVIVLDVNPVQRIVKQETKILSQCLDSAIVFANAHLMQSSNNELAVMACHG
HSAKFLYPCENAAEIRQIDGQYERFTMVERTVRLQLQKVINELSTDTPLNTESLISGALS
MALCYIARLERDKVAGQKLHPRILVITASNDSATQYMNYMNIFFTAQKMNVILDVCSLDQ
ELTLLQQGCDITGGNYLKVPQLAGLLQYLLWVFLPDPNVRSKLVLPPPVKVDYRAACFCH
QELIDIGYVCSICLSVFCKFSPICTTCHTVFKMPGPIPMKMKKKKKTIDIVH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgaaataaatacaagtttgttagtgatagtactggatgtaaatccagtgcaa
aggatagttaagcaagaaaccaagatattgtcacaatgtttggactctgcaattgttttt
gccaatgctcatctcatgcaatcatccaacaatgaattagcagtgatggcatgtcatggt
catagtgctaagtttctctatccatgtgagaatgcagcagaaatcagacagatagatggt
caatatgaacgatttacaatggtggaacgtacagtacgtctgcaattacagaaagttatc
aacgagctttctacggatactccattgaatactgaaagccttatttctggtgcacttagc
atggcactatgttatattgcccggctggagcgtgacaaggttgctggtcagaaactgcat
cccagaatattggtgattactgccagtaatgattctgctacacagtatatgaattacatg
aatatattcttcacggcacaaaagatgaatgttattctagatgtgtgtagtttggatcag
gaactgacacttttacaacagggctgtgatatcactggtggcaattacttgaaggtgcca
caacttgctggtttgctgcagtatttattgtgggtttttctaccagatcctaatgttaga
tcaaaattagttcttccgccgccagttaaagtcgattatagagcagcatgtttctgtcat
caggaacttattgacattggatatgtctgttccatatgtttatcagttttttgcaagttc
agtccaatatgcacaacttgtcacacggtgttcaaaatgccaggacccataccgatgaag
atgaagaagaaaaaaaagaccatagatatcgttcattag
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