Harpegnathos saltator (Jerdon's jumping ant): 105185284
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Entry
105185284 CDS
T03918
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105185284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hst03041
]
105185284
03009 Ribosome biogenesis [BR:
hst03009
]
105185284
Enzymes [BR:
hst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105185284
Spliceosome [BR:
hst03041
]
Complex A
U1 snRNP components
U1 related factors
105185284
Complex B
105185284
Ribosome biogenesis [BR:
hst03009
]
Eukaryotic type
Pre-60S particles
Helicases
105185284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
AAA_30
Motif
Other DBs
NCBI-GeneID:
105185284
NCBI-ProteinID:
XP_011142959
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MLQRLAGILGHTKQGVHLLNTSRYNNAASNGYRAAGQWARNVNGGVGNNLQKPDWQYENL
KPLKKDFYNIHPNVLARSAQEIELYRQKKQITVKGDKVPDPIQYFEEGNFPENIMNAMIN
KFGFQEPTAIQAQGWPIAMSGYNMVGIGQTGSGKTLGYILPAIVHINAQERLNHGDGPIA
LILAPTRELAQQIQSVTTDFGSLSYVRSTCIFGGAPRGGQARDLRRGVEICIATPGRLID
FLEQGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRTLA
KEYLKNYVQLNIGSLTLAANHDILQIVEVCEEYEKEAKLKTLLENIHDANEDSSKIIIFV
ETKKKVESITRSIRRFGWPAVCIHGDKSQHERDFVLREFRNKKSSILVATDVAARGLDVD
DVKYVINFDYPSSSEDYIHRIGRTGRSGNTGTSYALFTPQNARQARDLINVLKEAKQEVN
PQLIKFAMNSGGGGGGYGNRNRWGYGNRGRETVFRGTHKRFDTNRISNYNR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaagactagctgggattttaggacatacaaaacaaggggtccacttgctaaat
acatctcgttacaacaatgctgctagtaatggatatcgtgcagcaggacaatgggctcgc
aatgttaatggcggggtcggcaacaatttgcaaaagcccgactggcagtacgaaaatcta
aaaccactaaagaaagacttctataacatacatccaaatgtactggcacgtagtgcccag
gagattgaattgtacagacagaagaagcagattactgtaaagggtgacaaagttcccgat
cctatccagtactttgaggagggtaactttcctgaaaatattatgaatgccatgatcaac
aagtttggcttccaagagccgactgcgattcaagctcaaggttggccgattgctatgtct
gggtacaacatggtaggcatagggcaaacaggctcgggaaagactctaggttacattttg
cccgccattgtgcacattaacgctcaagaacgcttgaatcatggtgatggcccgatcgcg
ttaattctcgccccgaccagagagctcgcacaacagattcaatcagtgacgaccgatttc
ggttctttgtcgtatgtgagaagcacctgtatcttcggtggtgcgcccaggggtggtcaa
gcgcgcgatctacgtcgtggtgtagagatttgtattgctacacctgggcgtctgatcgat
ttcctagaacagggcacgaccaacctgcgaaggtgtacgtacttggtgctggacgaagct
gatcgtatgctggacatgggcttcgagcctcaaattcgcaagattatcgagcaaattagg
ccagatcggcaggttctcatgtggtctgccacgtggccgaaagaggtgcgcactctcgcg
aaagaatatctaaagaactatgttcaactgaacattgggtcgctgacgttagctgccaat
catgatattcttcaaattgtcgaagtctgcgaggaatacgagaaggaagccaaattgaag
actttactggaaaatatccacgatgctaacgaggatagtagcaagattataatttttgta
gaaacaaagaaaaaggtggagagcattacgagaagtatccgtcgttttggttggcctgcg
gtatgcattcatggcgacaagtcgcaacatgagagagattttgtccttagagaattcaga
aataagaaaagttccattcttgttgcaactgacgttgctgctcgtggtcttgatgtcgac
gatgtgaagtatgtaatcaacttcgattatccatcctcgtccgaagattatatccatagg
atcggcagaactggccgctcaggaaacacggggacaagttatgccttattcacgccgcaa
aatgcccgtcaagcgagagatttgataaacgtgctcaaagaagctaaacaagaggtcaat
cctcaactaattaaatttgcgatgaacagtggtggcggcggtggcggatatggcaacagg
aatcgttggggatacggtaatcgtgggagagagactgttttccgcggtacacataagaga
ttcgatactaacagaatatccaattacaatagatga
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