Harpegnathos saltator (Jerdon's jumping ant): 105185827
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Entry
105185827 CDS
T03918
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105185827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hst03021
]
105185827
Enzymes [BR:
hst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105185827
Transcription machinery [BR:
hst03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105185827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
105185827
NCBI-ProteinID:
XP_011143918
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MNKFRHKPRTTPKHLDPKYLMFSVFTANDIRNLSVTKIRTPLSFNILGHPLKGGLYDPVL
GPLMGNSEPCGTCGGNVHTCTGHFGHIELSMPVVNPLFHKVLCMLIKLSCLSCFTFQIPP
YVKLLLSAKWKLLYEGQLSDIDNLDQEVTSTVAEIPNVLEAQTEYIRDFIDNYIQNIYNR
DRFSCGVPQNHENQMNTKNINMQWHMYVDNILKQYKAVKICINCHEVIPKISVMQNKIMT
TKLNNSKDSAPKEMVSSTVVHKLETVMIMPDQSKEYLRKLWNNEKDFLKLIIPCLDLMDI
EYPTDVFFLEVIPVLPPIVRPVNILHGQVIEHPQTQVYKNIMQDCLILRNIIQTIQDGGT
DQLPQEGRLVFEQIRGLTAIEKLHNAWQGLQVNVDHLMDREMSKTSESVHCQGLKQIIEK
KEGIIRMHMMGKRVNFAARSVITPDPNLNIDEIGIPEAFALKLTYPVPVTPWNVVELRRL
ILNGPDVHPGAVMVENEDGMIQAISSNDSTKREAVAKRLFTTNSRTNKFFSGIKVIYRHL
QNGDVLLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNE
LARSESYNIVSVSNQYLVPKDGTPLSGLIQDHMVSGVRLTSRGRFFSRADYTQLVYTALS
MKQGDIILLPPAIIKPKLQWSGKQILSTVIINIIPGNKARINLTSNTKISLKEWQVNEPR
RWKCGKEFDDPKTMSEMEVIIRHGELLCGVLDKMHYGATPYGLIHCIYELYGGTCASKML
SAFGKLFQAFLQWNGFTLGIEDILITREADEKRKEIISNSKIIGSSIQRSAVELSDDTPM
DEVRVKTEESYWSNSKFRAQVDRKYKNMLDVYTNDINKTCLPMGLSKKFPDNNLQLMVQS
GAKGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPSFQAYDSTPRAGGYIVGRFMTGIK
SQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVINYDSTVRDSDGSLIQFYYG
EDGLDIPGSRFLKKEQIPFLVDNKDAIVDAEALENLKTGSSNNEKIMKLIKKIKKWKIKN
GPPLQKRRISEFSKFSMENVNQNNNTKKNSVEKNCGRTKAALSLIKKWMKIDKEMKKMFH
IQCVRCPDPIMSKYRQDVEFGVLSERLESLLEEYLSHSPNIIKKSLRDLLSMKVMKTICP
PGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGDMNVTLGIPRLREILMMASKNIKTPSMEI
PFKSNLQKLTKQSKKLRVKLTKCVLSDVLKIITISRKMEEAPHRRLVHTIKIEFLPYKYY
KGEFFVHPQYVIKQTEKTFFKNIFKEIKKIAKITGTLLYFEENNRKRTNNEDAMLDQADP
DEEESVRRERREDMRGERDLGEMHESSDEERAAEDADATMNRSISRHRENQEYEDPEEEE
MEDVMNNENEEADNNANKDLGNNQFDEDDDDDDDDDDDMTENLNYRKNDKRNSNRRSEVI
HMYKNALDYDYDENKFSWCQFTFWLPLKMIKLDLPTIIRNVASKTVLWETPYIKKAFTFQ
NNEGEMILKTDGLNIVEMFKYDSILNLNKLYSNDIYNISQTYGIEAANRVIIKEIRDVFK
MYGITVDSRHLSLIADYMTFDGTFQPLSRKGMENSSSPLQQMSFESSLNFLKTATLQGKK
DDLLSPSSRLMLGQPCKSGTGICSLFVNI
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattcaggcataaaccacgcacaacaccaaaacatttggatccaaaatatttg
atgttctctgtatttacagcaaatgatataagaaatttaagtgtaacaaaaattaggaca
ccattgtcttttaacattcttggacatcctttaaagggtggattgtatgatccagtttta
ggcccattaatgggtaattcggaaccatgtggtacatgtggcggtaatgtccatacatgc
acgggtcactttggacacatagaattgtcaatgccggttgtcaacccattatttcataaa
gtattatgcatgttaatcaaattgtcatgcttgtcgtgtttcacctttcaaataccacca
tacgtcaagttattattatctgccaaatggaagttactctatgaaggacaactgagtgat
atcgataatttagatcaagaagtaacatcaacagtagctgagataccgaacgtcttagag
gcacaaacagaatatattcgtgatttcattgacaattacatacaaaatatttataacagg
gacagattcagctgtggtgtgcctcagaatcatgaaaatcaaatgaatacaaagaatatt
aatatgcaatggcatatgtacgttgataatatactcaaacaatataaagctgtaaaaata
tgtattaattgtcacgaagtcataccaaagatttcagtgatgcaaaataaaataatgaca
actaaattgaacaattctaaggattccgctcctaaggaaatggtgtctagcacagtggtg
cataaattagagacagtgatgattatgccggatcagtctaaagaatatctgcgcaaattg
tggaacaatgaaaaggatttccttaagttaattataccctgtttggacttaatggacatc
gaatatcccactgatgtgttcttcctcgaagtaatacctgtattgccaccgatcgtacgg
cccgtaaatatacttcacggccaagtgattgaacatccacaaactcaagtatacaaaaac
atcatgcaagactgtcttattttgagaaatattatacaaacaattcaagatggaggtact
gatcaattacctcaagaaggtcgattagttttcgaacagataagagggcttacagcaatt
gagaaattgcataatgcttggcaaggactacaagtcaatgtggaccatttgatggatcgt
gagatgagtaagacttcggaatcggttcattgtcagggtttgaaacagattatcgagaag
aaggaaggtattatcagaatgcatatgatgggtaaaagagtaaattttgctgcgcgctca
gttatcactccagatcctaacttgaacatcgatgagatcggtattcctgaagcttttgct
ctcaagctgacgtatcccgtgccagtgacaccgtggaatgtcgtcgaattgcgacgatta
attctgaatggacctgacgttcatcctggcgcagttatggtagagaacgaggatggaatg
atacaagctatcagcagtaatgattctacaaagagagaagctgtcgcgaaacgtctcttc
acaacgaacagcagaactaacaaattctttagcggcattaaagtgatataccgtcacttg
caaaacggagatgtattattattgaacagacaaccgacgttacacaagcctagtataatg
gctcataaagcacgtattcttaagggggaaaaaactttacgtcttcattatgcgaattgc
aaagcatacaacgcagattttgacggtgatgagatgaacgctcatttcccgcaaaacgaa
ctagctagaagtgagagttacaatatagttagtgtctcaaatcaatatcttgtaccgaaa
gatggaacgccattgagtggtcttatacaggatcatatggtgtccggagtacgattaaca
tcaagaggtagatttttttcgagggcggattacacgcaattggtttacaccgcactgtca
atgaaacaaggcgatatcattcttctacctccagctattatcaaaccgaaattacagtgg
tctggtaaacaaattctatcaactgtcattatcaatattatccccggtaataaggcgcga
attaatttaacttccaacacgaaaatcagtttgaaggagtggcaggtgaacgaaccgcga
cgttggaaatgcggaaaagaatttgatgacccaaagactatgtcggaaatggaagttata
attcgacatggtgagttattgtgtggtgtcctcgataaaatgcattatggtgcaactccg
tatggtcttattcattgtatttatgaattgtacggtggtacgtgcgcgagtaagatgctg
agtgcttttggcaaactcttccaagcgtttttacaatggaacggattcacgcttggtatc
gaagatattttaataactcgcgaggctgacgagaaacgcaaagaaattatctccaatagt
aaaattatcgggagtagtatacagagatctgccgtagagctatccgatgatacacctatg
gacgaagtcagagttaaaacagaagaatcctactggagtaactcaaagtttcgcgcacag
gttgatcgcaagtataaaaatatgctggatgtttacaccaatgatatcaataaaacatgt
ctaccaatgggactttcgaaaaaatttcctgacaataatttacaacttatggtacaatcc
ggtgcgaaaggatccacagtaaacactatgcagatatcgtgtttattaggacaaatcgag
ttggaaggtaaaagaccgccgttaatgattagcggaaaaagtttaccgagttttcaggca
tatgattcaacacctagagccggtggttacatcgtaggaagatttatgactggcatcaag
tctcaggaattctttttccattgtatggcaggtcgcgaaggtcttatcgataccgctgtt
aaaacaagcagatccggatatttacaaagatgtcttataaaacatttagagggtctagtt
atcaattacgattcaacagtcagagactctgatggtagtctgattcagttttactatggc
gaagatggtctcgatatacccggctcgcgtttcttaaaaaaggagcaaataccattttta
gttgacaataaagatgctatcgtagatgcagaagcattagagaatctcaaaacaggatcg
agtaataatgaaaaaatcatgaagttaataaagaaaattaagaaatggaaaattaaaaat
ggtcctcctttacagaaaaggaggatcagtgaatttagtaaattttctatggagaatgtt
aatcagaataataatacaaagaaaaacagcgtcgagaagaattgtggaaggactaaggct
gcgttatcacttataaaaaaatggatgaaaatagataaggaaatgaagaaaatgtttcat
atacaatgtgttaggtgtcccgatccgataatgtcgaagtatagacaagatgttgaattt
ggtgtactatcggaacgattagaaagcttactggaagaatatctctcccattcaccaaat
attatcaagaaaagcttgagggacctattatctatgaaggttatgaaaaccatttgtcca
cccggcgaaccagtcggtttattagcagcacaatctattggtgaaccatccactcaaatg
actctgaatacatttcattttgcaggacgtggagacatgaacgtaaccttaggtattcct
aggttacgagagattctaatgatggcatcgaagaatatcaaaactccaagtatggagata
cctttcaaaagcaatctgcaaaaactcacgaagcagtcgaagaaattgcgcgtaaaatta
actaaatgtgttttgagcgacgtattaaaaataatcacaataagcagaaaaatggaagag
gccccgcatagaagattagtgcacactataaagatagagtttcttccttataaatattat
aagggagagttctttgttcatccgcagtacgtgattaaacagacggaaaaaacttttttc
aaaaatatatttaaggaaattaagaaaatcgccaaaataactggcactttattatacttc
gaagaaaataatagaaaacggacaaataatgaggatgcaatgttagatcaggctgatcct
gatgaagaagaaagtgtgagaagagaaagaagagaagacatgcggggggagagagactta
ggagagatgcatgaatcatccgatgaagaaagagctgcagaagatgctgatgccacgatg
aatagatcgatatcacgtcatcgagaaaatcaagaatatgaggatccggaagaagaggaa
atggaagatgttatgaacaatgagaatgaagaagcagacaataatgcgaataaagattta
ggaaacaatcaatttgatgaagatgatgatgatgatgatgatgatgatgatgatatgaca
gaaaacttaaattacaggaaaaatgataaacgtaattctaatagaagaagtgaagttata
catatgtataagaatgcgttggattatgattatgatgagaataaattttcatggtgtcaa
tttacattttggttaccgcttaaaatgataaaattagatctgccaacaataatcagaaat
gttgcgagcaaaactgttttatgggaaaccccgtatatcaaaaaagcctttactttccaa
aataatgaaggtgaaatgattcttaaaacggacggtttaaacatagtggaaatgtttaaa
tatgacagtattcttaatttaaataaattatattccaacgacatctataatatttctcag
acatatgggattgaagctgcaaatagagtcattataaaagaaattagagacgtctttaaa
atgtatggcatcaccgttgactctagacatctatcactaatcgcagattacatgacgttt
gatggcacatttcaaccacttagtcgtaaaggaatggaaaactcatcttcgccgttgcag
caaatgagcttcgaaagttcattgaattttctaaaaactgcgacattgcaagggaaaaag
gatgatttattatcaccttcaagtagacttatgctgggacaaccttgtaaatctggtact
ggaatatgttctctatttgttaatatatga
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integrated database retrieval system
