Harpegnathos saltator (Jerdon's jumping ant): 105186476
Help
Entry
105186476 CDS
T03918
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst04512
ECM-receptor interaction
hst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105186476
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105186476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hst04147
]
105186476
00536 Glycosaminoglycan binding proteins [BR:
hst00536
]
105186476
Exosome [BR:
hst04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105186476
Glycosaminoglycan binding proteins [BR:
hst00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105186476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105186476
NCBI-ProteinID:
XP_011145012
LinkDB
All DBs
Position
Unknown
AA seq
1881 aa
AA seq
DB search
MRPRAAATSTTDDAGRGISRPIPLVVLRTTCVLALLVLAATWIPVAEAVICRDSYKCNCT
GIKGQPGFPGIPGPQGTEGLPGDIGPDGPPGPKGEKGAGGEPGATGEKGNRGEEGIPGFE
GSPGRSGHPGIPGVMGPDGLDGCNGTDGREGAPGIPGLYGPRGPIGPIGDYGYPGEPGDG
GINSVGAKGIRGNPGVDGPQGYPGAYGLTGEVGYPGDTGDFGLTGSPGLPGMQGDRGDSV
YGVKGQLGEQGDRGEAGSPGKDEYKKQETTPVKGQPGPKGMKGDYGNRGFTGEIGIKGPR
GRSGFQGAKGVKGEQGDDGPRGKQGVEGPPGPAGEKGEKGAPGFAGSPGLDGSDGEPGEE
GNRGPPGKQGAEGELGQYIPELDEIIAGNIGIQGDLGPLGEAGEPGTPGQTGKVGFIGPP
GPPGPPGISGLPGAKGSSIKGEQGDDGLPGPIGPQGLPGSSGLPGIVGAKGFPGVTINGP
PGPDGFPGIPGALGPPGDRGDPGLPGEKGFPGKGIRIRGPTGERGLPGIPGFTGPDGWPS
GPGPKGVKGIRGDDCGVCAPGLPGEKGERGESGLDGYPGASGFPGLPGPRGLKGIQGKRG
PVGPPGLEGDSGRPGIEGSPGPKGEVGKIYYPPDEKFISPPGDIGEKGLPGPEGLRGPRG
KPGLIGDAGAPGPKGEKGEHGAPGLPGRDGLPGWDGIDGEEGEDASIPVVFLRGDPGYLG
ESGIKGIEGDKGIKGESGVSVEYIQETKGDKGFKGVRGSPGEPGYKGFQGHPGDEGLTGL
PGETGSPGISPQGPIGLKGYPGMPGDQGFRGTPGSPGSQGPVGFPGRIGNKGERGDLGTN
LTYGEIGERGWYGPKGDIGFAGPQGLPGRPGEDAAKGVKGAKGAPGYEGLPGLQGTKGQR
GDSIQGGRGLPGIPGQPGMPGRIGDIGIRGPDGPSGFDGMKGLKGELGFIGRRGDDGDSG
LQGYQGMHGRQGAPGAPGIKGEVGGIGESGPSGWLGADGIDGAPGPKGETGEIGEPGVPG
VRGSPGFKGIMGDYGPEGYSGLPGENSFSGPQGDIGEPGFMGEIGPPGLTGFDGRPGLPG
EPGLSTDGFNGLQGQKGEPGFDGFDGVEGSKGEIGDMGPDGVKGERGDRGFSGRRGLQGA
PGRHGAKGLRGRIGPAGFDGLEGKRGPDGDPGLMGRPGMPGDVGFRGAPGIMGAPGLKGY
IGEPGSPSYAFAEKGDYGNRGHDGFPGVKGQVGESGYIGVLGRKGQTGDRGYPGPTGFPG
LPGFPGLPGDQGPPGTPGLVVEYAEPGEIGRAGLDGLPGVPGRPAQKGAPGEYGPNGPKG
ISGDIGDSIRGPKGVVGEPGFRGFVGVPGVPGLQGVQGFRGAPGLKGFRGEPGIPAGSAK
GQPGEPGFIGLDGRTGPKGMKGDSGLPGFNGLPGPKGERGNAGEPGVPGLPGPDGPQGPK
GELGINPFPPFPRRGVRGDIGAPGLPGFPGQQGMMGEPGKDGLPGREGERGMIGLPGLQG
RDGEDGPEGYPGSRGITGRQGQPGFPGAPGAPAPNGIGPRDRGFSFARHSQSEMIPICPR
NTVKLWEGFSLLHTMGNGRAYAQDLGAAGSCVKKFSTMPFLFCNLNNVCDYANRNDYSYW
LSTTEPMPTMMTPIPAPEVGRYLSRCAVCEAPTRVIAVHSQSMAIPECPGGWEEIWVGYS
FLMHRDAAADGGGQSLVSPGSCLEDFRIRPFIECRGLGTCNYFATATSYWLATVHDNEMF
RKPQQQTLKADHTSRVSRCAVCIRRRITEGHGRTELKPFTANSERSPSNVHYPPSPRYPT
HNQPPRTRPSHERYPSNQDGYSSQGRYSGQNRYSNQDRYSNQDRYPNNQERYPNNRLISH
RRRGRVRDRQGERPSEFDNQP
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccagggccgcggcaacgtcaaccaccgacgacgcgggccgcggcatctcgcgg
ccgatcccgctcgtcgtcctgcgaaccacctgcgtccttgccctactggtgctggccgcc
acgtggataccggtcgccgaggctgtgatctgcagagactcttacaaatgcaattgcacc
ggaatcaaagggcagccgggattcccggggatacctgggccccaaggaacggagggtctc
cctggcgacatcgggcccgatggaccaccagggcccaagggcgagaagggagcgggcgga
gagcccggagccaccggagagaagggcaatcgaggtgaagaaggtataccaggattcgaa
ggaagtccgggacgctccggtcaccccggtatacccggcgtgatgggcccggacgggctg
gacgggtgcaacggtacggacggtcgcgagggtgcaccaggtatacccggactttacggg
ccgcgcggcccgataggaccgataggagattacggttacccgggagagcccggcgacgga
ggcatcaattcggtcggtgccaaaggaatccgcgggaatcccggcgtggacgggccgcag
ggttatccaggagcgtatgggcttaccggcgaagtgggttatccaggtgacaccggcgac
ttcggtttgacaggttcacccggattgccgggtatgcaaggtgaccgtggtgacagcgtc
tacggtgtgaagggccaacttggcgaacagggtgacagaggggaggccggatcgcctggt
aaagacgaatataagaagcaagaaacgacgcccgtgaaaggccaacctgggccaaagggc
atgaagggcgactatggaaatcgagggttcaccggagagattggtatcaaaggtccacgg
gggcgatcaggcttccagggcgccaagggtgtgaagggcgagcaaggtgacgatgggcca
agaggcaagcagggtgtcgagggcccgccaggtccagctggtgaaaagggagagaaagga
gctccaggattcgccggatcacctggcctggatgggagtgatggagaaccaggagaagaa
ggaaaccgtggtccgccaggcaaacagggtgctgaaggagaactcggacaatatattcca
gaactcgacgagataatcgccggaaatatcggaatacaaggagatctaggtcctcttggc
gaggctggcgagcctggaacaccgggccagacaggaaaagtaggcttcattggtcctcca
ggaccaccgggacctccgggtatctccggtttgccgggagcgaagggttcgtccataaaa
ggagaacaaggagacgacggcttaccgggtccaatcggacctcaaggacttcctgggtcg
tctggtttacccggaatcgtgggagccaaaggattccctggtgtaacgataaatgggcca
ccaggaccagacggcttcccgggcattccgggagcgctaggccctcctggtgatcgtgga
gatcctggtcttcctggagaaaaaggttttcccggaaaaggcataaggattcgcggacca
actggagagcgaggtttaccgggcataccgggttttaccggtcccgacggctggcccagt
ggacctggccctaaaggtgtcaagggtattcgaggagacgactgcggcgtctgtgcaccc
ggtctacccggtgagaaaggagagcgcggtgagtctggtttggacgggtatccgggtgca
tcaggtttccccggtctacctggtcctcgaggtttgaaaggaatacaaggaaaacgagga
ccggtcggacctcctggactcgagggtgacagcggaaggcctggtattgagggaagccca
ggacccaaaggcgaagtgggcaaaatatattacccgccagacgagaaattcatcagtcca
ccgggtgacatcggcgagaagggcttacctggaccggaaggactcagaggtccacgagga
aaaccgggactcattggtgacgcaggtgcaccgggaccgaagggagaaaagggtgaacat
ggtgcgcccgggttaccaggaagagacggtttaccagggtgggacggtatagatggtgaa
gaaggtgaagacgcttcgataccggtagtattcttgcgcggagatcccggatatctagga
gaatcaggaataaaaggaatagaaggagacaagggcatcaagggtgaaagtggagtatct
gtggagtacattcaagagactaagggtgataagggcttcaaaggtgtcagaggatctcct
ggtgagcctggttacaaaggcttccaaggacacccaggagacgaaggtctgacaggatta
cccggtgagactggatcgccaggtatttcgcctcaaggtcctataggtttaaagggctat
ccgggaatgccgggagatcaaggattccgtggcacaccaggatcacctggatcacaagga
ccagtaggttttccgggtcgcatcggtaacaaaggtgaacgaggagatctgggcacgaat
ctaacttatggcgagataggagaacgcggatggtacggtccgaaaggagacatcggtttt
gcaggccctcaaggattgcctggacgaccaggagaggatgctgcaaagggcgtcaagggc
gctaaaggagcgcctggttatgagggtttgcctggacttcaaggaaccaaaggccaacgt
ggcgatagtatacaaggcggtcgaggtctgccaggtataccaggccaacctggaatgccg
ggaagaattggagatatcggcatacgtggtcccgatggtccctctgggtttgatgggatg
aaaggtctgaagggtgaactaggtttcatcggacgacgtggtgacgatggggactctgga
cttcaaggataccaaggaatgcacggtagacaaggtgcaccaggtgctccagggattaaa
ggagaagtcggcgggattggcgaatcaggtccatctggttggctcggtgccgacggtata
gacggagcgcccgggcctaaaggagaaacaggagagatcggagaacccggtgtgccggga
gtgagaggatcgcctggatttaaaggtatcatgggtgattatggtcccgaaggatattct
ggacttcctggcgagaactccttcagcggtcctcagggtgatatcggcgagcctggtttc
atgggagaaatcggaccacccggtctgactggatttgatggacgaccaggtttgccagga
gaaccaggattgtccactgacggcttcaacggcctgcaaggacaaaaaggagaacctgga
ttcgacggattcgatggtgtcgagggatcaaagggagaaatcggtgacatgggtcctgat
ggagtaaaaggcgagcgaggagatagaggtttctctggaaggcgaggcctacagggagcg
cccggtagacacggcgcgaaaggcttaagaggtcggattggtcccgctggattcgatgga
ttggaaggaaaacgcggtcctgatggtgatcctggtttaatgggtcgaccaggaatgccg
ggcgacgtgggtttcagaggagcacctggcattatgggtgctcctggacttaagggttac
ataggcgagcctggttcaccgtcttacgctttcgcggagaaaggtgattacggtaatcgt
ggtcacgatggtttccccggtgtgaaaggacaagtgggcgagtcgggatatatcggagta
ctcggccgtaagggtcaaaccggagaccgagggtatccaggacccactggtttcccagga
ttacccggtttccctggtctgccaggtgatcaaggacctcccggaactccaggtttggtt
gttgaatatgctgaacccggcgagattggtcgcgctggtctggatggtttgcctggagtc
ccaggacgtccagcacaaaagggagctcctggtgaatatggtccgaacggacctaaagga
atctccggagatataggcgacagcattcgcggcccgaaaggagttgtgggagaaccaggt
ttcagaggatttgtcggcgtaccgggcgtaccaggcttgcaaggagtgcaaggtttccgt
ggggcaccaggtctgaaaggtttccgcggagaaccaggaatacctgcaggcagcgccaaa
ggacaacctggcgagcctggttttattggactcgacggtcgaactggaccgaaaggaatg
aaaggtgacagtggtctacccgggtttaacggactacctggaccgaaaggagaaagaggt
aacgctggtgaacctggtgtacctggattgcctggtcctgacggacctcaagggccgaaa
ggggaacttggcataaatcctttcccgccgttcccgagacgaggagttcgaggtgacata
ggagcgccaggattaccgggtttccctggacaacagggaatgatgggtgaacctggtaaa
gacggtctgcctggacgagagggtgagagaggtatgataggtctgcctggactgcaagga
cgggacggcgaggatgggcctgagggttatccaggatctcgtggaataactggacgtcaa
ggacaaccaggattccccggcgcacctggtgcacccgcgccaaacggaatcggtccgaga
gatagaggattttcctttgctcgacactcgcagtctgaaatgataccaatctgtccaaga
aataccgtgaagttatgggaaggattctctctgttgcacaccatgggcaatggacgagct
tacgcgcaagatctcggtgctgctggtagctgcgtcaagaagttctctaccatgcctttc
ctattctgtaacctgaacaacgtatgcgattacgccaatcgcaacgactacagctactgg
ctcagcacgaccgagccgatgccgacgatgatgacaccgataccggcgccggaagttggt
agatacttatcgagatgcgccgtatgcgaggcgcccaccagagtgatagccgttcacagt
caatctatggctatacccgagtgtccgggtggctgggaggaaatctgggtcggatacagt
ttcctcatgcacagagacgcagcagccgacggcggtggccaatcactggtctctccggga
tcctgcctcgaagatttccgcatccggccgttcatcgagtgccgcggcctcggcacctgc
aactactttgccaccgcgacgtcgtactggctggcgacggtccacgacaatgagatgttc
cgcaagcctcagcagcagactctcaaggccgaccacacgtcccgggtgagccgttgcgcc
gtatgtatccgtcggcgcattaccgagggccacggcaggacggaactgaaacccttcact
gccaatagcgaacgttcaccgagcaatgttcattatcctccatcgccgcgctatccgacc
cataaccagccgcccagaacgcgacctagccatgagagatatcctagcaaccaggacgga
tattccagtcagggtagatattccggccagaacagatactccaatcaggacagatattcc
aaccaggacagatatcccaacaaccaggagagatatcctaataacagattgatcagccat
cgtaggagaggtcgcgtgcgcgacagacagggcgaacgaccatcagaattcgacaatcag
ccgtag
DBGET
integrated database retrieval system
