Harpegnathos saltator (Jerdon's jumping ant): 105186588
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Entry
105186588 CDS
T03918
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03018
RNA degradation
hst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105186588
09123 Folding, sorting and degradation
03018 RNA degradation
105186588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105186588
03041 Spliceosome [BR:
hst03041
]
105186588
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105186588
mRNA degradation factors
5'-3' decay
Lsm complex
105186588
Spliceosome [BR:
hst03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105186588
Complex C
U2 snRNP components
105186588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
105186588
NCBI-ProteinID:
XP_011145196
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDTDKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEAAVQTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctattctattcttttttcaagtccttgatcggcaaggatgtggttgtcgaattaaaa
aatgacctaagtatctgtggcacattgcattccgtcgatcagtacttaaatataaaattg
accgatatcagtgtaacagatacagataagtaccctcatatgctgtctgtaaaaaattgt
ttcattcgtggatctgtggtaaggtatgtacagcttccaggagatgaggtagatacccag
ctcttacaggatgcagcgcgcaaagaagcagcggttcaaacgagataa
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