Harpegnathos saltator (Jerdon's jumping ant): 105187959
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Entry
105187959 CDS
T03918
Name
(RefSeq) protein PAT1 homolog 1 isoform X2
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105187959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105187959
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105187959
mRNA degradation factors
5'-3' decay
Decapping complex
105187959
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3450
Motif
Other DBs
NCBI-GeneID:
105187959
NCBI-ProteinID:
XP_011147431
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MADSFFGFDTTLGDSGLEDGLDCPLEEDDLGEEEEYDALNDETFGPDATIGDWEKDHEKL
AKITESSRPHNQNATNKKNGVNVDIQDNLSHLVLDDKEGIVPRPGVWSSPSDLSLPKVRP
RLSLPTNLKNACTVEELERGLIANRPPPGLSKPQTQQQQKKSEGSLLFEALSLNEKLQIN
GLPPPLRFPPGLGIPGTHPMVLPNVRPPSQFMPPPRLLLNQSGNMLRYPVPHLMLPHTVQ
RQTLHGSYGFSQPPHPNLGSPQFLRPDHMMPPFSNNQTNHQQHQHSYSHSSNQRNQNRPY
HHNEQQSGHQPFFKNNQYLHRNHDRNNQRHYHNQYYSPSINGMNASGEYDEYAGLMSSRE
KQWLINIQLLQLNTIQPYIDDYYYTVFCDRQNKQHANQEQKDRKHYNNNGYHRDHRDWET
NPPQTLSRSAYTPATFENSLGKLHFSSVTAPRKIIDMDVVPNSDSQSTPQSQQKDTKRTR
QLLLEIERLYIILLKLEDLNNPLAVSSEPHQQQEGEAETSANKTEPELISMMLSSLQQLV
QDDKLASMLSIRKGKTLLLRFLPHLDVTEYQEQLKDLWTAIFKGLAIIGRRDCHLLTNFY
SEYRRWLNTVKSFDTILQLAGALSNSVVQPIKNNSLAFALMNKFGVSAIAALFEQSERLC
AAEVSLPSEWSAFVITITDMVGNSPSCVTPCQPVAANTLNKHLNRIPNLQIERSGHNFVM
TV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcttttttcggttttgatactacgcttggagatagtggtttagaggacgga
ttggattgtccgttagaagaagatgatcttggtgaagaagaagaatatgatgccttgaat
gatgaaacattcggtcctgacgctacaattggtgattgggaaaaggatcatgaaaaactt
gctaaaattacagaatcaagtcgcccacataatcagaatgcgacaaataagaagaatggt
gttaacgtagatattcaggataatttgtcgcatttggtattggatgacaaggaaggaata
gttccacgtcctggtgtatggagtagcccttctgatctatctcttcctaaagttcgtccc
cgtttatctctaccaactaacttgaaaaatgcctgtacagtggaagaattggaaaggggg
ctcattgcaaataggccaccaccaggtctcagtaaaccacaaacacaacaacagcagaag
aagtctgagggttcgcttctttttgaggctctgtctttgaatgagaaacttcagattaat
ggcctacccccgccgctacgctttccacctggattaggtatacctgggacgcatcctatg
gttttacctaatgtaagaccaccctcacaatttatgccacctcctagattactacttaat
caatctggaaatatgttacgttatcctgtaccgcatttaatgttgccacacacagtacaa
aggcaaactcttcatggctcctatgggttctctcaaccgccacatccaaatttaggaagc
ccacagtttcttcggccagatcacatgatgcctcctttttctaataatcaaaccaaccat
caacaacatcaacattcttattcacattcaagtaatcagagaaaccagaatagaccttat
caccataatgaacaacaaagcggacatcaaccattttttaaaaataaccaataccttcat
cggaatcatgacagaaataatcaaagacattatcataatcaatattactctccaagtatt
aatggtatgaatgcttcgggggagtatgatgaatatgcaggtcttatgagtagtcgtgaa
aagcagtggttaattaatattcaactgttacaattgaatacaattcaaccatatatcgat
gactattattatactgtgttttgtgatagacaaaataaacaacatgcaaatcaagagcaa
aaagatagaaagcattataataataatggttatcacagggatcacagagattgggagaca
aatccacctcaaactctttcaagatcagcatatacgccagctacatttgaaaattcgttg
ggtaaacttcattttagtagtgtaactgcaccacgtaaaattatcgatatggatgttgta
ccaaatagcgactcgcaatctactcctcaatcccaacagaaagataccaaaagaacacga
caattacttcttgaaattgagaggctgtacataatactattgaaactcgaagatctgaac
aatcctcttgctgttagttcggagccacatcaacagcaagaaggagaagctgagacaagt
gcaaataaaactgaaccggaattaatcagcatgatgttatcgtcactacaacaattagta
caagatgacaaattagctagtatgctaagtattcgaaaaggaaagacattattactgcgt
tttttacctcacctggatgtgacagaatatcaagagcagttaaaagatttgtggactgca
atattcaaaggattagctataataggtcgtagagattgtcatttattaacaaacttttac
tccgaatatcgaagatggcttaatactgtgaaaagttttgatacaatactccaattagca
ggagcgttatctaattcggttgtacaacctattaaaaacaacagtttggcttttgctctt
atgaacaagtttggcgtatctgcgatagcggcactattcgagcaatctgaacgattgtgt
gctgcggaagtatccctgccttctgaatggtcggctttcgtaataacgataactgacatg
gtcggtaattcgccatcttgcgttacaccttgccaacccgttgctgcaaatacgctcaat
aaacatctgaatcggattcccaatttacagatagaaaggtcagggcataactttgtgatg
accgtataa
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