Harpegnathos saltator (Jerdon's jumping ant): 105188173
Help
Entry
105188173 CDS
T03918
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105188173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105188173
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105188173
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105188173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
105188173
NCBI-ProteinID:
XP_011147786
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MANLNFEQPPRSIANASLSSRTSGGGGLNTSALAGHVTPTSGMFSGSSASTSSTANSAVV
ITNVYPGASSSGSGQNSHQPQQQQLSPMGSRGLFGQRAFTDRRTMPALGASNPMGSMGSF
GIPPSRNYGSQGAVNNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPG
KQPYVGMVKQPTSEPSEFTMSSEDFPALPGTQNREGPSPGGSVSGDKNIPVGLGPEIGQD
VLQANRALGSEKSQSSKRGIQTSPDGKVTNIPASMVKDQFGMVGLLTFIRAAETDPNLVS
LALGQDLTALGLNLNSPENLYQNFGGPWAETPCRPQDIDFHVPPEYLINAAIRDKLAPVK
LNRYKDDLLFYMFYTNVGDVLQLAAAAELYNREWRYHVEEKVWITQAPGLGMVEKTSTYE
RGTYYYFDAQNWRKVAKEFHLDYTKLESKPYLPTNLHQTQP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgaactttgaacaaccaccacgcagtattgcgaatgcaagtctttcttca
cgcacaagtggtggggggggtttgaacacgtcggcccttgcgggtcatgtcacacccact
tcgggcatgttctcaggctcgtccgcaagcacttcaagtacggcaaattctgcggtagtc
atcactaacgtttatcccggtgcatctagctccggaagtggacagaatagtcatcaacca
cagcagcagcaactctctcctatgggcagtagaggactgtttgggcagagagcttttact
gacagacgtacgatgcctgctcttggagcttcgaatccaatgggtagtatgggcagtttc
ggaatacctccaagtcgtaattacggatctcaaggtgcggtcaataatttccactctgtt
ttcgggagtgggggtggcggagacacgagtactccgccactgttagatttatcagagttt
ccctccttaacaaatagaggtcaaggtgattctatgccacaacctagtcccatgccaggg
aagcaaccgtacgttggaatggtgaaacaaccgacatcggaaccaagtgaatttactatg
agttcggaagactttcccgcgttacccggtacgcaaaatagagagggcccgtcacccggt
ggcagtgtatctggtgataaaaatatacctgtaggactgggtccggagatcggacaggac
gtattacaggcaaacagagctctcggatctgagaaatctcagtcttctaagagaggcatt
caaacatcgcctgatggcaaggtgacgaacatacccgcaagtatggtgaaggatcaattc
ggcatggttggtcttttaacgtttatcagagcagcagagacagatccgaacttggtgtcg
ttggcgttaggccaagatcttactgcgttaggattgaatttgaattcgccggaaaatctc
tatcaaaacttcggtggtccttgggcagaaacaccctgtcgaccacaggatattgacttt
cacgtaccaccggagtatcttataaatgccgcgatcagggataagctagcgccagttaaa
ctaaatcgatataaagacgatctactgttttatatgttttatacaaatgttggggatgta
ttacaattagcggcagcggcagaactgtataacagagaatggcgatatcatgtagaagag
aaagtttggataacgcaggcaccaggtttggggatggtagaaaagacgtcgacatacgaa
cgtggtacttattattacttcgatgcgcaaaactggagaaaggtagctaaggaattccat
ttggattacacgaaactagaaagtaaaccttatcttcccacaaacttacaccaaactcag
ccttga
DBGET
integrated database retrieval system
