Harpegnathos saltator (Jerdon's jumping ant): 105189448
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Entry
105189448 CDS
T03918
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03018
RNA degradation
hst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105189448
09123 Folding, sorting and degradation
03018 RNA degradation
105189448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105189448
03041 Spliceosome [BR:
hst03041
]
105189448
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105189448
mRNA degradation factors
5'-3' decay
Lsm complex
105189448
Spliceosome [BR:
hst03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105189448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
105189448
NCBI-ProteinID:
XP_011149845
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNVNLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQMKSRGRGEIKGRGQSQRGRGGGRGTFGRGGRGPAPL
GRGGGTQLGNKSQNKPRPK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttacccttatctttattaaggactgcgcaaaaccaccctatgttggtggaactaaaa
aatggagaaacgtacaacggacatttggttagctgcgataactggatgaacgtcaatctc
agagaagtcatatgtacttcaagggacggtgataagttctggaggatgccagaatgttat
ataagaggcagtacaataaaatatttgaggatccctgatgaagtaatagatatggtaaag
gaagatgtacagatgaaatccagaggacgtggtgagatcaaaggtagaggccagagtcag
agaggacgtggtggtggaagaggtacttttggtagaggtggaagaggaccagctccattg
ggtcgtggaggagggacacaactgggaaataaatcacaaaataaaccaagaccaaaataa
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