Harpegnathos saltator (Jerdon's jumping ant): 105189449
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Entry
105189449 CDS
T03918
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03013
Nucleocytoplasmic transport
hst03015
mRNA surveillance pathway
hst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105189449
09122 Translation
03013 Nucleocytoplasmic transport
105189449
03015 mRNA surveillance pathway
105189449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105189449
03041 Spliceosome [BR:
hst03041
]
105189449
Enzymes [BR:
hst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105189449
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105189449
Spliceosome [BR:
hst03041
]
Complex C
Other components
EJC/TREX
105189449
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105189449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105189449
NCBI-ProteinID:
XP_011149846
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQNEQPDGSGDVPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTRE
LAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEDVLKTVCPHIVVGTPGRILALVRNKK
LNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHSKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLNGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagataatgatgatcttctggattatgaagatgaggagcagaatgaacagcctgat
ggaagtggagatgttcctgccaagaaggaagtaaagggcacgtacgtctctatccacagc
agtggattcagagattttcttttgaaaccagagattctacgtgctattgttgattgcggt
tttgaacatccatctgaagtacaacatgaatgcattcctcaagcggtacttggaatggat
atattatgtcaagcaaaatctggtatgggaaaaactgctgtatttgtattagccactcta
cagcaattggaattgacagagaatcaagtctatgtcctggtaatgtgccatactcgagaa
ttagcattccaaatcagtaaggagtatgaaagattcagcaaatacatgccgcatgtaaaa
gttggtgtattttttggtggcttacctattcagaaagatgaagatgtcttgaagactgta
tgccctcatattgtcgtcggtacccctggacgtatcctcgctcttgtgcggaataagaaa
ttgaacctgaaacatctgaaacatttcatattagatgaatgtgacaagatgcttgaatta
ctagacatgcgccgggacgtacaggaaatatttagaagcacgccacatagcaagcaagtt
atgatgttcagcgctacgttgtccaaggagatacgtcctgtctgcaaaaagttcatgcaa
gatcccatggaagtctatgtcgatgacgaggcgaagctcaccttgaacggtctacaacaa
cattatgttaaattgaaggagaacgagaagaacaagaagttatttgaacttctggatgta
ctcgaatttaatcaggttgttatattcgtgaagtcagtacaaagatgtatggctttagcg
caacttctgacagagcagaatttccctgcaattggaattcaccgaggcatgacgcaagag
gaacgattatccagatatcagcaattcaaagattttcaaaagcgtattttggtagcaacg
aacctgtttggacgtggtatggatatagaacgcgtcaatatcgtgtttaattacgatatg
ccggaagattccgacacgtacttgcatagagttgcacgtgctggtcgtttcggcacaaag
ggccttgctatcacgttagtcagcgacgagagtgatgccaagatattgaacgacgttcaa
gaaaggtttgacgtaaatatcacagaattgccggacgaaattgatctcgcttcttatatt
gaaggacgatga
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