Harpegnathos saltator (Jerdon's jumping ant): 105190388
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Entry
105190388 CDS
T03918
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst04512
ECM-receptor interaction
hst04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105190388
04518 Integrin signaling
105190388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hst00536
]
105190388
Glycosaminoglycan binding proteins [BR:
hst00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105190388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
105190388
NCBI-ProteinID:
XP_011151431
LinkDB
All DBs
Position
Unknown
AA seq
1509 aa
AA seq
DB search
MRRRVVELAAGLFAVQLLLLLPPTSQVDAAKNRLRKQRSKPAALQAQQPGSDYDYDYYEN
YDEYEEKNETITTLPSPVIPNTRLSGRTESAVESTQATYRQETPTDLPTSTTTRFYNHDL
EETNRTSERDPVSTEILPGESNVYSSVAVPGPRGEPGRPGDIGRPGDSGFPGHPGTPGIP
GPPGPPGPVPDVSLYYQQLALSQANEDKGPTGAAASLYGPDAFSYIQAQTGPIGPRGPPG
PPGAPGPQGFQGTRGEPGESGTSGPPGVSGPRGLPGLPGKDGVSGEDGETGPPGSPGPVG
PRGLPGMPGLTGMKGHRGFPGLDGAKGEQGTTGEKGSMGAPGPMGPIGQIGPAGPRGERG
REGPSGPPGMRGVDGISGPPGQPGAVGKSGPPGFPGSPGAKGDQGAQGPKGSQGLQGPRG
ESGRPGQPGETGSQGPQGKDGVPGEKGMAGAAGPAGVPGFPGTRGQPGIAGNPGVPGAKG
IPGLPGERGFKGDAGVKGDSGVPGPRGLPGPPGNEGKRGKRGMRGPVGAAGPPGERGLPG
IRGLPGPDGPIGPQGQPGDRGSVGSIGPKGATGDPGRPGPPGLQGARGLMGRPGAPGKPG
NPGERGIQGADGKSGEQGSPGLQGLPGPLGAPGERGYPGEPGKDGEAGNPGPPGPRGDAG
KEGPPGMQGAPGPTGNTGARGSPGSSGTRGFQGLPGAAGNPGIPGKDGEAGVQGPPGLPG
PVGNRGERGPPGERGPMGQPGPMGLRGETGAQGADGLTGLPGSKGDQGISGQPGLLGLPG
PRGLSGEPGQKGERGAFGPVGLEGPPGRIGERGPQGEVGPSGPPGEPAERGDPGPPGPTG
EPGAPGNPGERGLQGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGSSGLPGSPGEVG
PQGLTGLTGTKGIRGEPGARGEPGLMGPPGVTGQVGPAGPPGNVGSPGVPGTSGIKGNAG
DVGRQGFPGPIGNPGPPGIDGNKGESGSPGPSGPAGLQGPQGTPGERGLPGLPGSPGPIG
NRGLRGAPGETGQPGKPGSEGPSGPSGLVGPPGLPGHIGETGPEGPVGKPGPPGISGRPG
DKGPPGIPGAIGQSGPPGLPGSPGQAGHTGLPGERGSKGEAGPQGVEGQQGPRGKAGPPG
LEGAKGDHGEEGQKGAKGHRGFNGLQGLPGSPGLPGEKGMPGLPGLPGKDGEPGIRGSPG
REGSPGPIGLIGNPGLRGPPGEEGRHGSPGPPGPPGPPGPPGELGFGYDAASLAALIGQG
QTKGPDPLGDEPPRIFGKDITEEERKELLQKAYENLKSSFLKLVKPDGQKSSPAKTCRDL
FVAYPDKLSGEYWIDPNEGDIRDAILVHCDAKKRATCILPSPARTPEITHITDQQEIWLS
EIDSGMKITYKADSNQISFLQLLSKHAQQNITYHCKNSVAYFDYERKTHRKGLKLLAWND
VELTPRGNQRHRYEMIMDECKLHQNHWGKTVVSYETDKPIRIPILDVALRDIGRPEQSFS
VEIGAACYE
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgagacgacgggtcgtagagctggccgcggggctcttcgcggtccaactgctgctgctg
ttgccaccaacgagtcaggtggatgctgcgaagaaccggctgaggaaacaacgatccaag
cctgcggctctgcaagctcagcaacctggcagcgattacgattatgattattacgagaac
tacgacgaatacgaggagaaaaatgagaccataacgacattgccatcacctgtgatacca
aatacacgactttcgggaaggactgaatcggcagttgaaagtacgcaagccacatataga
caagaaacacccacagacttgccgacttcaacaacaactcgattttacaaccatgacttg
gaggaaactaatcgtacatctgaacgggatccggtatctacggaaatcttaccgggtgaa
agtaacgtatacagttccgtggctgtaccaggtccacggggcgagcctgggcgacccgga
gacattggtcgtccaggagattcaggatttcctggacaccccggcactcctggaattcct
ggaccacctggacctccaggccctgtacctgatgtatctctgtattatcaacaattggct
ttatctcaagcaaatgaggataaaggcccaacgggtgcagcggcatcattatatggtcct
gacgcattttcttatattcaagcgcaaacaggaccaataggtcctcgaggtcctccaggt
cctcctggagctcccggtcctcaaggttttcaaggtacacgtggtgaacccggtgaatca
gggacttcaggtcctcctggtgtgtcaggtccaagaggtcttccaggattgcctggaaaa
gacggtgttagcggagaagatggtgagaccggtcctccagggtcgcctggtcctgtaggc
ccacgtggtctcccagggatgcctggacttacaggaatgaaaggccatcgcggttttcct
ggtctagatggagccaaaggggagcaaggaactactggtgagaaaggatctatgggtgca
ccgggacccatggggccgatagggcaaataggtccagcaggaccgcgtggtgaacgaggt
agagaaggcccatcagggcctccaggaatgagaggcgttgatggaatttctggaccacct
ggacaacctggtgctgtgggtaaatctggtccaccaggctttccaggcagtcctggagct
aagggagatcaaggagcgcaaggaccaaaaggaagtcaaggtttacaaggtccacgaggg
gaaagtggccgtccgggacaacctggtgaaactggctcacagggtccgcagggtaaagac
ggagttcccggtgaaaaaggaatggctggagcggcaggtcctgctggcgtgcctggattt
ccaggtacacgaggtcaacctggaatagcaggtaatcctggcgttcctggagccaaagga
atacccggtcttcctggtgaaaggggcttcaaaggagatgctggtgtaaaaggagattca
ggagtgcctggtccacgtggactgccgggaccaccagggaacgaagggaaaagaggaaag
agaggaatgcgtggaccagttggtgctgcgggccctcctggagaacgtggtctacctgga
atacgaggacttcctggaccggacggtcctatcggacctcaaggacaacccggtgatcgt
ggttctgtaggatcaattggaccgaaaggtgctaccggagatcctgggcgacctggacca
ccaggactacagggcgcacgcggtttaatgggtagacctggagcccctggcaaaccaggc
aatcctggcgaacgtggaatccaaggtgcagatggaaagtccggagaacaaggttcacct
ggattgcaaggcctaccaggaccattaggagcaccaggagagagaggatatcctggagaa
cctgggaaagatggtgaagctggtaatccgggtccacctggtccaagaggtgacgctggt
aaagaaggacctccgggcatgcaaggagcaccgggaccaacaggaaacactggtgcgaga
ggttctccgggatcttctgggactagaggttttcaaggtcttccaggcgccgctggtaat
ccaggtattccaggtaaggatggagaagcaggcgtgcaagggcctcccggtttaccgggg
ccagttggcaatagaggtgaacgaggacctccgggagaaaggggaccaatgggacagcca
ggacctatgggtttaaggggagaaaccggagcacaaggcgctgatggtctcactggatta
ccaggatctaagggagaccaaggaatttctggtcaacctgggttattagggcttcctggt
ccaagaggattatctggagaacctggacaaaaaggagaaagaggagcatttgggccagtt
ggactcgaaggtcctccaggacgcattggagaacgtggtccgcaaggagaagttggtcct
tctggtcctcctggagaaccagcggaacgaggtgatccaggtccacctggtcctactggt
gagcctggcgctcctggaaatccaggagaaagaggtcttcaaggactacaaggatcccag
ggtttcccaggcccacaaggattaataggacttcctggtttgaagggtgatcgtggttat
ccaggattaaaaggagaacaaggaagttcaggactacctggcagtcctggcgaagttgga
ccgcaaggacttactggacttactggtactaaaggaattagaggcgaaccgggtgcacgc
ggtgaacctggtttaatgggaccgcctggtgttacaggacaagttggtccagcaggtcca
cctgggaatgtaggatcacccggtgttccaggtacttcaggtataaaaggcaatgcaggt
gacgttggacgccaaggatttccaggtccaatcggtaatcctggaccacctggaatagat
ggaaataaaggagaaagcggatctccagggccttcaggaccagctggccttcaaggacct
caaggtacacccggtgagagaggtttaccaggtttacccggttctcctggtcctatagga
aatagaggattacgcggagcacccggtgaaactggacaaccaggaaagccgggatcggaa
gggccatctgggccatcgggcttagtgggtcctcctggtcttcctggtcacataggagaa
acagggccagaaggaccagttggaaaaccaggaccgccgggaataagtggtcgacctgga
gataaaggaccgcctggtatacctggcgcaataggccaatctggccctcctggattacct
ggatcacctggacaagcaggacatacgggacttcctggagaacgtgggtcaaaaggagaa
gcgggtccgcaaggtgtggaaggtcaacagggaccacgaggaaaagctggaccaccaggt
ctcgaaggggcaaagggcgatcatggagaagagggacagaaaggtgctaagggacatcgt
ggatttaatggtttacaaggattacctggatctcctgggttaccaggagagaaaggtatg
cctggtttgccaggacttcccggtaaagatggggaacctgggattagaggtagtcctgga
cgggaaggtagtccaggacctatcggacttataggaaatcctggactaagaggtccacct
ggtgaagaaggacgtcatggatcaccaggtcctccaggacctcctggaccacctggtcct
cctggagaacttggttttggatacgatgccgcatctctagcagcacttataggacaaggc
caaactaaagggcctgatcctcttggcgatgaaccaccgaggatatttggcaaagatatc
actgaagaagaaagaaaggaattacttcagaaagcatatgaaaatttgaagtcttccttt
ttaaaactagtgaagccggatggtcaaaagagttcaccagctaaaacctgtcgagattta
tttgttgcatatccagataaattatccggcgaatactggattgacccgaatgaaggggat
attcgagatgcgatcttagtgcattgcgatgctaaaaagcgtgctacctgcattttacca
agtcctgctcgtacaccggaaatcactcacatcaccgatcaacaagaaatttggctcagc
gagatagacagcggcatgaagatcacatacaaggcagacagcaatcagatcagttttctg
caactgctctcgaaacacgcgcaacaaaacatcacgtatcactgtaaaaatagcgtggca
tacttcgattacgagcgaaaaacgcacagaaaaggcttgaagctcctggcttggaatgac
gtcgagctgacaccgcgaggtaatcaacgtcacagatacgaaatgataatggatgagtgt
aagctgcatcaaaatcactggggtaaaactgtcgtttcatatgagaccgacaaacccata
aggattcccattctagatgtggccttgcgtgatatcggacgacccgagcaaagtttctcc
gtcgagattggcgcagcttgttatgaataa
DBGET
integrated database retrieval system